Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
PTPREP23469 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPREP23469 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.19□□□□□ -1.1
PTPREP23469 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PTPREP23469 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPREP23469 AC132219.2-201ENST00000624416 2327 ntBASIC8.19□□□□□ -1.1
PTPREP23469 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.19□□□□□ -1.1
PTPREP23469 CTAGE11P-201ENST00000451540 2353 ntBASIC8.19□□□□□ -1.1
PTPREP23469 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPREP23469 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPREP23469 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPREP23469 AP002364.1-201ENST00000623330 3386 ntBASIC8.19□□□□□ -1.1
PTPREP23469 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPREP23469 RNU6-582P-201ENST00000362989 107 ntBASIC8.19□□□□□ -1.1
PTPREP23469 RNU6-33P-201ENST00000384793 107 ntBASIC8.19□□□□□ -1.1
PTPREP23469 TMSB4XP8-201ENST00000402089 135 ntBASIC8.19□□□□□ -1.1
PTPREP23469 MRPL42P2-201ENST00000403169 426 ntBASIC8.19□□□□□ -1.1
PTPREP23469 AL353133.1-201ENST00000407695 401 ntBASIC8.19□□□□□ -1.1
PTPREP23469 RN7SKP232-201ENST00000410170 290 ntBASIC8.19□□□□□ -1.1
PTPREP23469 TMSB4XP6-201ENST00000415187 135 ntBASIC8.19□□□□□ -1.1
PTPREP23469 RPSAP60-201ENST00000415403 880 ntBASIC8.19□□□□□ -1.1
PTPREP23469 PTPN2P1-201ENST00000423212 1072 ntBASIC8.19□□□□□ -1.1
PTPREP23469 TMSB4XP1-201ENST00000424567 135 ntBASIC8.19□□□□□ -1.1
PTPREP23469 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPREP23469 RPSAP40-201ENST00000442343 891 ntBASIC8.19□□□□□ -1.1
PTPREP23469 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPREP23469 PSPC1P2-201ENST00000455130 225 ntBASIC8.19□□□□□ -1.1
PTPREP23469 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPREP23469 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPREP23469 AC110749.1-201ENST00000462007 357 ntBASIC8.19□□□□□ -1.1
PTPREP23469 RPL12P20-201ENST00000475538 479 ntBASIC8.19□□□□□ -1.1
PTPREP23469 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPREP23469 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPREP23469 MTCYBP40-201ENST00000509390 1135 ntBASIC8.19□□□□□ -1.1
PTPREP23469 TMEM248P1-201ENST00000510579 951 ntBASIC8.19□□□□□ -1.1
PTPREP23469 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPREP23469 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC8.19□□□□□ -1.1
PTPREP23469 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPREP23469 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPREP23469 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PTPREP23469 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC8.19□□□□□ -1.1
PTPREP23469 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPREP23469 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC8.19□□□□□ -1.1
PTPREP23469 AC099489.2-201ENST00000574976 260 ntBASIC8.19□□□□□ -1.1
PTPREP23469 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPREP23469 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPREP23469 RPL26P30-202ENST00000602923 645 ntBASIC8.19□□□□□ -1.1
PTPREP23469 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPREP23469 AC018765.1-201ENST00000623357 3446 ntBASIC8.19□□□□□ -1.1
PTPREP23469 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PTPREP23469 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPREP23469 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPREP23469 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
PTPREP23469 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC8.19□□□□□ -1.1
PTPREP23469 MTND5P19-201ENST00000424872 1794 ntBASIC8.19□□□□□ -1.1
PTPREP23469 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PTPREP23469 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPREP23469 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
PTPREP23469 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.19□□□□□ -1.1
PTPREP23469 BRD7P1-201ENST00000557705 1915 ntBASIC8.19□□□□□ -1.1
PTPREP23469 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPREP23469 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTPREP23469 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PTPREP23469 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
PTPREP23469 AL449283.1-201ENST00000602631 3403 ntBASIC8.18□□□□□ -1.1
PTPREP23469 AP001157.1-201ENST00000550837 2339 ntBASIC8.18□□□□□ -1.1
PTPREP23469 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PTPREP23469 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PTPREP23469 Y_RNA.100-201ENST00000363141 102 ntBASIC8.18□□□□□ -1.1
PTPREP23469 RN7SKP107-201ENST00000364157 290 ntBASIC8.18□□□□□ -1.1
PTPREP23469 Y_RNA.255-201ENST00000364581 97 ntBASIC8.18□□□□□ -1.1
PTPREP23469 RNA5SP176-201ENST00000390956 110 ntBASIC8.18□□□□□ -1.1
PTPREP23469 RNU6-244P-201ENST00000391028 104 ntBASIC8.18□□□□□ -1.1
PTPREP23469 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PTPREP23469 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC8.18□□□□□ -1.1
PTPREP23469 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.18□□□□□ -1.1
PTPREP23469 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC8.18□□□□□ -1.1
PTPREP23469 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
PTPREP23469 RPL21P110-201ENST00000433345 446 ntBASIC8.18□□□□□ -1.1
PTPREP23469 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPREP23469 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC8.18□□□□□ -1.1
PTPREP23469 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.18□□□□□ -1.1
PTPREP23469 AL392103.1-201ENST00000447000 198 ntBASIC8.18□□□□□ -1.1
PTPREP23469 AL136981.1-203ENST00000451452 3844 ntBASIC8.18□□□□□ -1.1
PTPREP23469 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC8.18□□□□□ -1.1
PTPREP23469 AL034369.1-201ENST00000453808 477 ntBASIC8.18□□□□□ -1.1
PTPREP23469 RPL12P25-201ENST00000455592 494 ntBASIC8.18□□□□□ -1.1
PTPREP23469 UOX-201ENST00000471089 899 ntBASIC8.18□□□□□ -1.1
PTPREP23469 AC098818.1-201ENST00000478593 252 ntBASIC8.18□□□□□ -1.1
PTPREP23469 AC083904.1-201ENST00000487828 231 ntBASIC8.18□□□□□ -1.1
PTPREP23469 PABPC1P1-201ENST00000506347 591 ntBASIC8.18□□□□□ -1.1
PTPREP23469 AC079140.5-201ENST00000507882 310 ntBASIC8.18□□□□□ -1.1
PTPREP23469 AC138517.1-201ENST00000515724 568 ntBASIC8.18□□□□□ -1.1
PTPREP23469 RNU6-976P-201ENST00000516086 111 ntBASIC8.18□□□□□ -1.1
PTPREP23469 RN7SKP183-201ENST00000517169 324 ntBASIC8.18□□□□□ -1.1
PTPREP23469 IGLVVI-25-1-201ENST00000521893 249 ntBASIC8.18□□□□□ -1.1
PTPREP23469 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC8.18□□□□□ -1.1
PTPREP23469 AP000827.1-201ENST00000527814 258 ntBASIC8.18□□□□□ -1.1
PTPREP23469 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.18□□□□□ -1.1
PTPREP23469 OR4T1P-201ENST00000554933 911 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms