Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MRPL50P1-201ENST00000431951 384 ntBASIC4.89□□□□□ -1.63
COL11A1P12107 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL11A1P12107 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.89□□□□□ -1.63
COL11A1P12107 MIR2116-201ENST00000517221 80 ntBASIC4.89□□□□□ -1.63
COL11A1P12107 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.89□□□□□ -1.63
COL11A1P12107 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.89□□□□□ -1.63
COL11A1P12107 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL11A1P12107 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL11A1P12107 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL11A1P12107 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
COL11A1P12107 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL11A1P12107 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.89□□□□□ -1.63
COL11A1P12107 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.89□□□□□ -1.63
COL11A1P12107 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL11A1P12107 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL11A1P12107 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL11A1P12107 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.88□□□□□ -1.63
COL11A1P12107 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.88□□□□□ -1.63
COL11A1P12107 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL11A1P12107 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL11A1P12107 OR11H4-201ENST00000315409 1082 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 RPS3AP25-201ENST00000411660 793 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 OR5BE1P-201ENST00000425977 939 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.88□□□□□ -1.63
COL11A1P12107 RPS7P7-201ENST00000463499 571 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 AC039056.2-201ENST00000622261 511 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 OR5BE1P-202ENST00000641168 1176 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL11A1P12107 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.88□□□□□ -1.63
COL11A1P12107 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL11A1P12107 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL11A1P12107 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL11A1P12107 AL122126.1-201ENST00000546905 1318 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL11A1P12107 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL11A1P12107 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
COL11A1P12107 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.88□□□□□ -1.63
COL11A1P12107 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL11A1P12107 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
COL11A1P12107 AMZ2P2-201ENST00000406819 1057 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 RN7SKP182-201ENST00000410772 298 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 TPT1P2-201ENST00000413105 503 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 AL450992.3-201ENST00000413192 568 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.88□□□□□ -1.63
COL11A1P12107 RPS4XP4-201ENST00000443195 763 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 VN1R32P-201ENST00000452234 905 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 AC090013.1-201ENST00000485147 480 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.88□□□□□ -1.63
COL11A1P12107 AL592156.1-201ENST00000508758 304 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.88□□□□□ -1.63
COL11A1P12107 AC120057.2-201ENST00000571520 271 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 HMGB2P1-201ENST00000591146 634 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 AC138965.3-201ENST00000623875 498 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 AC112484.5-201ENST00000624189 228 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 AC112200.1-201ENST00000625015 234 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 MIR3653-201ENST00000625572 110 ntBASIC4.88□□□□□ -1.63
COL11A1P12107 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL11A1P12107 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.88□□□□□ -1.63
COL11A1P12107 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
COL11A1P12107 AC027228.2-201ENST00000567141 2154 ntBASIC4.87□□□□□ -1.63
COL11A1P12107 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL11A1P12107 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL11A1P12107 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL11A1P12107 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL11A1P12107 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL11A1P12107 U3.23-201ENST00000391132 200 ntBASIC4.87□□□□□ -1.63
COL11A1P12107 AL590806.1-201ENST00000415818 853 ntBASIC4.87□□□□□ -1.63
COL11A1P12107 AC006946.1-201ENST00000429106 328 ntBASIC4.87□□□□□ -1.63
COL11A1P12107 ABCF2P2-201ENST00000450549 296 ntBASIC4.87□□□□□ -1.63
COL11A1P12107 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.87□□□□□ -1.63
COL11A1P12107 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.87□□□□□ -1.63
COL11A1P12107 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.87□□□□□ -1.63
COL11A1P12107 AC034105.4-201ENST00000568304 277 ntBASIC4.87□□□□□ -1.63
COL11A1P12107 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC4.87□□□□□ -1.63
COL11A1P12107 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.87□□□□□ -1.63
COL11A1P12107 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.87□□□□□ -1.63
COL11A1P12107 AC012442.3-202ENST00000636742 206 ntBASIC4.87□□□□□ -1.63
COL11A1P12107 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.87□□□□□ -1.63
COL11A1P12107 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
COL11A1P12107 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL11A1P12107 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL11A1P12107 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.87□□□□□ -1.63
COL11A1P12107 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.87□□□□□ -1.63
COL11A1P12107 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL11A1P12107 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL11A1P12107 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL11A1P12107 RNA5SP130-201ENST00000364431 114 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL11A1P12107 RPS29P7-201ENST00000439662 171 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 ARAFP2-201ENST00000440565 559 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 RPL23AP81-201ENST00000455252 467 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL11A1P12107 AC079804.1-201ENST00000461922 436 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.86□□□□□ -1.63
COL11A1P12107 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.86□□□□□ -1.63
COL11A1P12107 GTF2IP22-201ENST00000554443 182 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 AC008966.2-201ENST00000606157 453 ntBASIC4.86□□□□□ -1.63
COL11A1P12107 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.86□□□□□ -1.63
COL11A1P12107 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms