Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC015795.1-201ENST00000513669 327 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.04□□□□□ -1.6
CHRNA1P02708 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA1P02708 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.04□□□□□ -1.6
CHRNA1P02708 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.04□□□□□ -1.6
CHRNA1P02708 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.04□□□□□ -1.6
CHRNA1P02708 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA1P02708 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA1P02708 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA1P02708 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHRNA1P02708 AC104118.1-201ENST00000607625 1589 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 SMG1P4-204ENST00000523028 4131 ntBASIC5.04□□□□□ -1.6
CHRNA1P02708 SALL4P2-201ENST00000423288 2910 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CHRNA1P02708 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CHRNA1P02708 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA1P02708 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA1P02708 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CHRNA1P02708 AP000580.1-201ENST00000404439 358 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 U3.35-201ENST00000408405 208 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 RN7SKP97-201ENST00000410966 333 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA1P02708 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA1P02708 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA1P02708 AL606490.8-201ENST00000441624 319 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 PTMAP3-201ENST00000447474 330 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA1P02708 HSPE1P22-201ENST00000456856 327 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 CYCSP34-201ENST00000458172 304 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 AC091917.2-201ENST00000505002 744 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA1P02708 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA1P02708 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA1P02708 AL109766.1-201ENST00000555080 552 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CHRNA1P02708 CD24P2-201ENST00000565486 219 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA1P02708 AC233702.9-201ENST00000581528 203 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA1P02708 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA1P02708 AC092653.1-201ENST00000608509 531 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 AC107905.1-201ENST00000616204 426 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA1P02708 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA1P02708 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA1P02708 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA1P02708 AL450326.2-201ENST00000421913 1962 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 MFSD8-220ENST00000641243 1422 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA1P02708 AC100778.3-201ENST00000580060 1750 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 AP001642.1-201ENST00000624727 2117 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 AC107021.2-201ENST00000567714 2095 ntBASIC5.03□□□□□ -1.6
CHRNA1P02708 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA1P02708 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA1P02708 AC009951.1-201ENST00000623674 2614 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA1P02708 AL731566.1-201ENST00000620490 1937 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 AC008549.2-201ENST00000333482 706 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 Y_RNA.126-201ENST00000363382 111 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.02□□□□□ -1.61
CHRNA1P02708 AC007738.1-201ENST00000413892 348 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 RPL34P6-201ENST00000432390 345 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA1P02708 AC004938.1-201ENST00000438468 308 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 MTND6P18-201ENST00000439477 513 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.02□□□□□ -1.61
CHRNA1P02708 RPS6P2-201ENST00000454208 705 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 RPL7AP52-201ENST00000458096 790 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 RN7SL303P-201ENST00000469773 251 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 RPL21P6-201ENST00000479171 504 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 AC098799.3-201ENST00000506095 438 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 AC008676.3-201ENST00000521237 435 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.02□□□□□ -1.61
CHRNA1P02708 MIR3160-1-201ENST00000577972 85 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 SNORD39.2-201ENST00000579995 76 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.02□□□□□ -1.61
CHRNA1P02708 AC138473.1-201ENST00000605717 526 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 AC117490.2-201ENST00000610042 594 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 AP000843.1-201ENST00000624880 701 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 VN2R3P-201ENST00000422626 1412 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.02□□□□□ -1.61
CHRNA1P02708 AL034370.1-201ENST00000397254 1590 ntBASIC5.02□□□□□ -1.61
CHRNA1P02708 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA1P02708 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.02□□□□□ -1.61
CHRNA1P02708 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHRNA1P02708 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CHRNA1P02708 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA1P02708 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CHRNA1P02708 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA1P02708 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.01□□□□□ -1.61
CHRNA1P02708 AC091046.3-201ENST00000631455 1574 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 AL136164.3-201ENST00000624429 3978 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA1P02708 AC017079.1-201ENST00000333650 415 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 SDHCP2-201ENST00000398565 501 ntBASIC5.01□□□□□ -1.61
CHRNA1P02708 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.01□□□□□ -1.61
CHRNA1P02708 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms