Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.14□□□□□ -1.59
COL4A1P02462 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A1P02462 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A1P02462 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A1P02462 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
COL4A1P02462 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A1P02462 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A1P02462 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.14□□□□□ -1.59
COL4A1P02462 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.14□□□□□ -1.59
COL4A1P02462 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.14□□□□□ -1.59
COL4A1P02462 OR8F1P-201ENST00000425243 930 ntBASIC5.14□□□□□ -1.59
COL4A1P02462 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.14□□□□□ -1.59
COL4A1P02462 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.14□□□□□ -1.59
COL4A1P02462 RPS20P4-201ENST00000461659 355 ntBASIC5.14□□□□□ -1.59
COL4A1P02462 AC079804.1-201ENST00000461922 436 ntBASIC5.14□□□□□ -1.59
COL4A1P02462 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.14□□□□□ -1.59
COL4A1P02462 DEFB109A-201ENST00000482450 265 ntBASIC5.14□□□□□ -1.59
COL4A1P02462 RPS4XP15-201ENST00000489210 795 ntBASIC5.14□□□□□ -1.59
COL4A1P02462 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A1P02462 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.14□□□□□ -1.59
COL4A1P02462 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.14□□□□□ -1.59
COL4A1P02462 AC027455.1-201ENST00000574104 594 ntBASIC5.14□□□□□ -1.59
COL4A1P02462 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COL4A1P02462 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
COL4A1P02462 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A1P02462 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A1P02462 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A1P02462 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.13□□□□□ -1.59
COL4A1P02462 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 AC126323.6-202ENST00000568092 3511 ntBASIC5.13□□□□□ -1.59
COL4A1P02462 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.13□□□□□ -1.59
COL4A1P02462 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.13□□□□□ -1.59
COL4A1P02462 RNA5SP513-201ENST00000364648 118 ntBASIC5.13□□□□□ -1.59
COL4A1P02462 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.13□□□□□ -1.59
COL4A1P02462 AL500522.2-201ENST00000448562 343 ntBASIC5.13□□□□□ -1.59
COL4A1P02462 AL445433.1-201ENST00000457507 257 ntBASIC5.13□□□□□ -1.59
COL4A1P02462 RPS29P19-201ENST00000479709 171 ntBASIC5.13□□□□□ -1.59
COL4A1P02462 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.13□□□□□ -1.59
COL4A1P02462 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.13□□□□□ -1.59
COL4A1P02462 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.13□□□□□ -1.59
COL4A1P02462 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.13□□□□□ -1.59
COL4A1P02462 AC124068.1-201ENST00000563131 678 ntBASIC5.13□□□□□ -1.59
COL4A1P02462 AC120057.2-201ENST00000571520 271 ntBASIC5.13□□□□□ -1.59
COL4A1P02462 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.13□□□□□ -1.59
COL4A1P02462 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.13□□□□□ -1.59
COL4A1P02462 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.13□□□□□ -1.59
COL4A1P02462 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.13□□□□□ -1.59
COL4A1P02462 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.13□□□□□ -1.59
COL4A1P02462 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.13□□□□□ -1.59
COL4A1P02462 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 AC017104.4-201ENST00000636283 1592 ntBASIC5.13□□□□□ -1.59
COL4A1P02462 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A1P02462 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
COL4A1P02462 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A1P02462 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A1P02462 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A1P02462 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL4A1P02462 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL4A1P02462 HSPE1P12-201ENST00000412576 301 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A1P02462 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A1P02462 AL358472.1-201ENST00000431295 329 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 CEACAMP1-201ENST00000434624 1035 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 AC022336.1-201ENST00000475510 337 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A1P02462 AC138832.1-201ENST00000522871 556 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 YPEL5P3-201ENST00000547227 352 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 AGGF1P6-201ENST00000569213 976 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A1P02462 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A1P02462 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A1P02462 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.12□□□□□ -1.59
COL4A1P02462 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A1P02462 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL4A1P02462 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A1P02462 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A1P02462 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A1P02462 MIR670-201ENST00000390142 98 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 AL607077.1-201ENST00000401718 499 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A1P02462 GOT2P5-201ENST00000433995 546 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A1P02462 MIR5684-201ENST00000585074 65 ntBASIC5.12□□□□□ -1.59
COL4A1P02462 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.12□□□□□ -1.59
COL4A1P02462 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.12□□□□□ -1.59
COL4A1P02462 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL4A1P02462 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.11□□□□□ -1.59
COL4A1P02462 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A1P02462 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COL4A1P02462 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A1P02462 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms