Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRKNO60260 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 AC053481.2-202ENST00000582394 1500 ntBASIC4.56□□□□□ -1.68
PRKNO60260 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PRKNO60260 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
PRKNO60260 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PRKNO60260 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.56□□□□□ -1.68
PRKNO60260 ZNF652P1-201ENST00000442420 1309 ntBASIC4.56□□□□□ -1.68
PRKNO60260 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PRKNO60260 RN7SKP103-201ENST00000363848 320 ntBASIC4.56□□□□□ -1.68
PRKNO60260 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 RNU6-729P-201ENST00000384399 107 ntBASIC4.56□□□□□ -1.68
PRKNO60260 MIR585-201ENST00000384887 94 ntBASIC4.56□□□□□ -1.68
PRKNO60260 HMGB1P10-201ENST00000395823 563 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.56□□□□□ -1.68
PRKNO60260 XKRYP4-201ENST00000414395 483 ntBASIC4.56□□□□□ -1.68
PRKNO60260 PCNPP4-201ENST00000414817 517 ntBASIC4.56□□□□□ -1.68
PRKNO60260 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
PRKNO60260 AC004074.1-201ENST00000421810 1063 ntBASIC4.56□□□□□ -1.68
PRKNO60260 PTP4A1P7-201ENST00000423476 514 ntBASIC4.56□□□□□ -1.68
PRKNO60260 VTI1BP4-201ENST00000427516 527 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AL136231.1-201ENST00000429407 730 ntBASIC4.56□□□□□ -1.68
PRKNO60260 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.56□□□□□ -1.68
PRKNO60260 AL049745.1-201ENST00000433953 286 ntBASIC4.56□□□□□ -1.68
PRKNO60260 FABP5P3-201ENST00000437960 408 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.56□□□□□ -1.68
PRKNO60260 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 AC000111.2-201ENST00000448200 210 ntBASIC4.56□□□□□ -1.68
PRKNO60260 XKRYP5-201ENST00000449659 483 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.56□□□□□ -1.68
PRKNO60260 AC091685.2-201ENST00000454924 864 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.56□□□□□ -1.68
PRKNO60260 AC092324.1-201ENST00000468671 324 ntBASIC4.56□□□□□ -1.68
PRKNO60260 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 AL049874.2-201ENST00000492636 288 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.56□□□□□ -1.68
PRKNO60260 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.56□□□□□ -1.68
PRKNO60260 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.56□□□□□ -1.68
PRKNO60260 GAPDHP56-201ENST00000506031 988 ntBASIC4.56□□□□□ -1.68
PRKNO60260 BTG4P1-201ENST00000510421 183 ntBASIC4.56□□□□□ -1.68
PRKNO60260 RN7SKP34-201ENST00000516142 244 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.56□□□□□ -1.68
PRKNO60260 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.56□□□□□ -1.68
PRKNO60260 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.56□□□□□ -1.68
PRKNO60260 MTCO2P2-201ENST00000591258 225 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AC006363.1-201ENST00000603806 463 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AC005084.1-201ENST00000605160 304 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AP001521.2-201ENST00000608772 546 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AC019206.1-201ENST00000621938 425 ntBASIC4.56□□□□□ -1.68
PRKNO60260 AL356863.1-201ENST00000623378 1080 ntBASIC4.56□□□□□ -1.68
PRKNO60260 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.56□□□□□ -1.68
PRKNO60260 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.56□□□□□ -1.68
PRKNO60260 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.56□□□□□ -1.68
PRKNO60260 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.56□□□□□ -1.68
PRKNO60260 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRKNO60260 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.55□□□□□ -1.68
PRKNO60260 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
PRKNO60260 AL672167.1-205ENST00000641112 3080 ntBASIC4.55□□□□□ -1.68
PRKNO60260 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 RNU5E-10P-201ENST00000363506 118 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AC234772.1-201ENST00000377927 937 ntBASIC4.55□□□□□ -1.68
PRKNO60260 GAPDHP15-201ENST00000398586 975 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AL034403.1-201ENST00000399414 885 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.55□□□□□ -1.68
PRKNO60260 AC008173.1-201ENST00000418901 264 ntBASIC4.55□□□□□ -1.68
PRKNO60260 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.55□□□□□ -1.68
PRKNO60260 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.55□□□□□ -1.68
PRKNO60260 MTND2P2-201ENST00000434633 945 ntBASIC4.55□□□□□ -1.68
PRKNO60260 MTND1P26-201ENST00000440488 538 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 AC044797.1-201ENST00000445744 679 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.55□□□□□ -1.68
PRKNO60260 AL009048.1-201ENST00000450437 298 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.55□□□□□ -1.68
PRKNO60260 TPT1P3-201ENST00000492841 512 ntBASIC4.55□□□□□ -1.68
PRKNO60260 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 MTCYBP19-201ENST00000517463 1124 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.55□□□□□ -1.68
PRKNO60260 AC005868.1-201ENST00000536421 331 ntBASIC4.55□□□□□ -1.68
PRKNO60260 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 DUX4L52-201ENST00000549363 777 ntBASIC4.55□□□□□ -1.68
PRKNO60260 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PRKNO60260 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.55□□□□□ -1.68
PRKNO60260 AL049839.1-201ENST00000556151 657 ntBASIC4.55□□□□□ -1.68
PRKNO60260 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.55□□□□□ -1.68
PRKNO60260 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms