Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
MSH4O15457 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
MSH4O15457 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MSH4O15457 RNA5SP307-201ENST00000362863 116 ntBASIC4.96□□□□□ -1.62
MSH4O15457 SNORA74C-2-201ENST00000411179 201 ntBASIC4.96□□□□□ -1.62
MSH4O15457 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.96□□□□□ -1.62
MSH4O15457 GAPDHP49-201ENST00000421421 961 ntBASIC4.96□□□□□ -1.62
MSH4O15457 RPL23AP25-201ENST00000430973 463 ntBASIC4.96□□□□□ -1.62
MSH4O15457 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.96□□□□□ -1.62
MSH4O15457 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MSH4O15457 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MSH4O15457 AC026979.1-201ENST00000492525 396 ntBASIC4.96□□□□□ -1.62
MSH4O15457 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.96□□□□□ -1.62
MSH4O15457 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MSH4O15457 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.96□□□□□ -1.62
MSH4O15457 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
MSH4O15457 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.96□□□□□ -1.62
MSH4O15457 AC021483.2-201ENST00000567415 758 ntBASIC4.96□□□□□ -1.62
MSH4O15457 AC113403.1-201ENST00000604910 193 ntBASIC4.96□□□□□ -1.62
MSH4O15457 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.96□□□□□ -1.62
MSH4O15457 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
MSH4O15457 AC083809.1-201ENST00000615051 472 ntBASIC4.96□□□□□ -1.62
MSH4O15457 uc_338.13-201ENST00000618243 179 ntBASIC4.96□□□□□ -1.62
MSH4O15457 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
MSH4O15457 AC007546.2-201ENST00000623996 360 ntBASIC4.96□□□□□ -1.62
MSH4O15457 EIF2AP4-201ENST00000424793 1781 ntBASIC4.96□□□□□ -1.62
MSH4O15457 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
MSH4O15457 CDC27P2-201ENST00000425026 1922 ntBASIC4.95□□□□□ -1.62
MSH4O15457 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
MSH4O15457 EOGT-210ENST00000615922 1931 ntBASIC4.95□□□□□ -1.62
MSH4O15457 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.95□□□□□ -1.62
MSH4O15457 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH4O15457 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH4O15457 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH4O15457 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH4O15457 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
MSH4O15457 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
MSH4O15457 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
MSH4O15457 AL583835.1-201ENST00000399570 407 ntBASIC4.95□□□□□ -1.62
MSH4O15457 AC097374.1-203ENST00000400783 485 ntBASIC4.95□□□□□ -1.62
MSH4O15457 AC136624.1-201ENST00000400791 413 ntBASIC4.95□□□□□ -1.62
MSH4O15457 SNORA11F-201ENST00000408237 128 ntBASIC4.95□□□□□ -1.62
MSH4O15457 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.95□□□□□ -1.62
MSH4O15457 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.95□□□□□ -1.62
MSH4O15457 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.95□□□□□ -1.62
MSH4O15457 RPL23AP52-201ENST00000439311 478 ntBASIC4.95□□□□□ -1.62
MSH4O15457 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.95□□□□□ -1.62
MSH4O15457 TPT1P1-201ENST00000458495 518 ntBASIC4.95□□□□□ -1.62
MSH4O15457 AC092905.1-201ENST00000467527 949 ntBASIC4.95□□□□□ -1.62
MSH4O15457 NDUFA5P9-201ENST00000472609 340 ntBASIC4.95□□□□□ -1.62
MSH4O15457 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MSH4O15457 AC090013.1-201ENST00000485147 480 ntBASIC4.95□□□□□ -1.62
MSH4O15457 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.95□□□□□ -1.62
MSH4O15457 AC093840.1-201ENST00000511599 336 ntBASIC4.95□□□□□ -1.62
MSH4O15457 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.95□□□□□ -1.62
MSH4O15457 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.95□□□□□ -1.62
MSH4O15457 OR5BC1P-201ENST00000529327 739 ntBASIC4.95□□□□□ -1.62
MSH4O15457 CYCSP28-201ENST00000534284 321 ntBASIC4.95□□□□□ -1.62
MSH4O15457 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.95□□□□□ -1.62
MSH4O15457 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.95□□□□□ -1.62
MSH4O15457 AP001542.1-201ENST00000591314 200 ntBASIC4.95□□□□□ -1.62
MSH4O15457 Z98200.1-201ENST00000607298 470 ntBASIC4.95□□□□□ -1.62
MSH4O15457 AC140113.4-201ENST00000622087 222 ntBASIC4.95□□□□□ -1.62
MSH4O15457 AC073869.7-201ENST00000640874 297 ntBASIC4.95□□□□□ -1.62
MSH4O15457 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH4O15457 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
MSH4O15457 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH4O15457 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH4O15457 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.95□□□□□ -1.62
MSH4O15457 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
MSH4O15457 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
MSH4O15457 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
MSH4O15457 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MSH4O15457 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
MSH4O15457 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
MSH4O15457 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MSH4O15457 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.94□□□□□ -1.62
MSH4O15457 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.94□□□□□ -1.62
MSH4O15457 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH4O15457 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 OR4K17-201ENST00000315543 1032 ntBASIC4.94□□□□□ -1.62
MSH4O15457 RPL32P3-201ENST00000359025 275 ntBASIC4.94□□□□□ -1.62
MSH4O15457 Y_RNA.62-201ENST00000362840 99 ntBASIC4.94□□□□□ -1.62
MSH4O15457 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH4O15457 HSPE1P16-201ENST00000426640 348 ntBASIC4.94□□□□□ -1.62
MSH4O15457 RPL7P32-201ENST00000457119 744 ntBASIC4.94□□□□□ -1.62
MSH4O15457 RNA5SP103-201ENST00000459503 118 ntBASIC4.94□□□□□ -1.62
MSH4O15457 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH4O15457 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH4O15457 AC091544.1-201ENST00000484702 348 ntBASIC4.94□□□□□ -1.62
MSH4O15457 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.94□□□□□ -1.62
MSH4O15457 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.94□□□□□ -1.62
MSH4O15457 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms