Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AC093084.1-201ENST00000424233 687 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.59□□□□□ -1.67
PDLIM1O00151 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PDLIM1O00151 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AC109780.1-201ENST00000451768 1344 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 AURKAPS1-201ENST00000451805 1212 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 AC009127.1-201ENST00000467090 155 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.59□□□□□ -1.67
PDLIM1O00151 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.59□□□□□ -1.67
PDLIM1O00151 RPS26P15-201ENST00000488067 348 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 RN7SL205P-201ENST00000490174 284 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.59□□□□□ -1.67
PDLIM1O00151 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.59□□□□□ -1.67
PDLIM1O00151 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.59□□□□□ -1.67
PDLIM1O00151 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.59□□□□□ -1.67
PDLIM1O00151 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.59□□□□□ -1.67
PDLIM1O00151 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AC074029.2-201ENST00000551045 634 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AC092868.3-201ENST00000560515 784 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 MIR4644-201ENST00000579929 84 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.59□□□□□ -1.67
PDLIM1O00151 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.59□□□□□ -1.67
PDLIM1O00151 MIR6719-201ENST00000622428 87 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
PDLIM1O00151 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDLIM1O00151 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDLIM1O00151 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.58□□□□□ -1.68
PDLIM1O00151 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM1O00151 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC027287.1-201ENST00000553115 1453 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.58□□□□□ -1.68
PDLIM1O00151 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
PDLIM1O00151 MIR105-2-201ENST00000385083 81 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AMZ2P2-201ENST00000406819 1057 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 SPTLC1P2-201ENST00000407089 121 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.58□□□□□ -1.68
PDLIM1O00151 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.58□□□□□ -1.68
PDLIM1O00151 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC092162.1-201ENST00000432828 434 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 PSMD10P3-201ENST00000437000 448 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 AC004938.1-201ENST00000438468 308 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 PPIAP17-201ENST00000438507 471 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.58□□□□□ -1.68
PDLIM1O00151 SCAND3P1-201ENST00000439854 1060 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 RPL10P17-201ENST00000453852 316 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 AC004815.1-201ENST00000484185 331 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC067904.2-201ENST00000517322 1283 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.58□□□□□ -1.68
PDLIM1O00151 OR10G5P-201ENST00000532733 358 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM1O00151 RFPL1S-203ENST00000539579 330 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 AC135001.1-201ENST00000544546 283 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.58□□□□□ -1.68
PDLIM1O00151 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC007620.3-201ENST00000608131 497 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.58□□□□□ -1.68
PDLIM1O00151 LINC01739-205ENST00000641890 573 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDLIM1O00151 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM1O00151 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM1O00151 AC007390.2-201ENST00000606229 3803 ntBASIC4.58□□□□□ -1.68
PDLIM1O00151 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM1O00151 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM1O00151 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM1O00151 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM1O00151 AC095050.2-201ENST00000510748 1458 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM1O00151 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.57□□□□□ -1.68
PDLIM1O00151 RPL23P2-201ENST00000320371 421 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM1O00151 MIR421-201ENST00000365696 85 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM1O00151 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDLIM1O00151 RNU1-106P-201ENST00000384382 164 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 MIR600-201ENST00000385007 98 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 MIR765-201ENST00000390226 114 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM1O00151 U3.35-201ENST00000408405 208 ntBASIC4.57□□□□□ -1.68
PDLIM1O00151 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDLIM1O00151 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms