Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRAV27A0A087WT01 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAV27A0A087WT01 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAV27A0A087WT01 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRAV27A0A087WT01 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
TRAV27A0A087WT01 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRAV27A0A087WT01 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRAV27A0A087WT01 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRAV27A0A087WT01 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC011266.1-201ENST00000624119 3569 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 MFSD8-242ENST00000641690 4199 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC000123.3-201ENST00000624029 4975 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 RN7SKP103-201ENST00000363848 320 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 MIR513A2-201ENST00000385249 127 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AL035419.1-201ENST00000397037 564 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AL583835.1-201ENST00000399570 407 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 RNU2-50P-201ENST00000410494 143 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AL356968.2-201ENST00000412769 1257 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC019050.1-201ENST00000418508 492 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC069213.2-201ENST00000420238 366 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 OR2X1P-201ENST00000421144 687 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC006065.1-201ENST00000422539 802 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 USP9YP9-201ENST00000429406 715 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC073264.2-201ENST00000448886 166 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 OR52A4P-201ENST00000472867 958 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC104164.2-201ENST00000496953 495 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 RPS27AP18-201ENST00000515536 459 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 IGLVIV-65-201ENST00000517313 360 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC124856.1-201ENST00000600819 896 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC115286.1-201ENST00000604298 434 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC012409.3-201ENST00000611343 981 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AL049539.1-201ENST00000611964 459 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AP001784.1-201ENST00000624107 428 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC016588.2-201ENST00000632484 3021 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AC027290.2-201ENST00000623210 18662 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 AL592148.3-201ENST00000608771 2646 ntBASIC3.89□□□□□ -1.79
TRAV27A0A087WT01 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 DHX40P1-201ENST00000588725 1412 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 OR4K15-201ENST00000305051 1216 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 MIR331-201ENST00000362302 94 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 RNA5SP175-201ENST00000364275 119 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 RBMY1KP-201ENST00000423480 476 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 NFYAP1-201ENST00000431953 972 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 CEACAMP1-201ENST00000434624 1035 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AL645937.3-201ENST00000453647 936 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 RNA5SP154-201ENST00000516193 111 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AC027176.2-201ENST00000559166 746 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AC124068.1-201ENST00000563131 678 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 MIR432-201ENST00000606207 94 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 AC120338.1-201ENST00000625074 1541 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 Z98755.1-201ENST00000407015 1384 ntBASIC3.88□□□□□ -1.79
TRAV27A0A087WT01 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms