Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX9Q9Y5X1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX9Q9Y5X1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX9Q9Y5X1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SNX9Q9Y5X1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.23□□□□□ -1.57
SNX9Q9Y5X1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX9Q9Y5X1 AL356317.1-201ENST00000396110 1436 ntBASIC5.23□□□□□ -1.57
SNX9Q9Y5X1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX9Q9Y5X1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 HSPA8P17-201ENST00000427029 1382 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 SNORA72.3-201ENST00000365074 132 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 RNA5SP345-201ENST00000410646 108 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 MTCO2P1-201ENST00000424648 477 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AL645638.1-201ENST00000440519 361 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AL513321.1-201ENST00000441175 761 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 OR1H1P-201ENST00000448731 937 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AL591363.1-201ENST00000450091 483 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 MTND2P6-201ENST00000455337 1030 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 RNA5SP103-201ENST00000459503 118 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 MTCO2P9-201ENST00000503214 694 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 OR7H2P-201ENST00000513483 306 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC067904.2-201ENST00000517322 1283 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 OR8X1P-201ENST00000534542 869 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AL049839.1-201ENST00000556151 657 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 MTND1P8-201ENST00000571424 950 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 MIR3667-201ENST00000581025 74 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 MIR4737-201ENST00000583979 81 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC097504.2-201ENST00000608088 454 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC015922.4-201ENST00000612568 690 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC008147.4-201ENST00000617570 1204 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AC068880.4-201ENST00000623082 495 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 AL731566.1-201ENST00000620490 1937 ntBASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX9Q9Y5X1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SNX9Q9Y5X1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
SNX9Q9Y5X1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 RNU6-650P-201ENST00000365658 111 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 UBBP2-201ENST00000376781 231 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 RNA5SP113-201ENST00000410486 84 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC004074.1-201ENST00000421810 1063 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 MRPL50P1-201ENST00000431951 384 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC092162.1-201ENST00000432828 434 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AL589765.3-201ENST00000446084 462 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 CLIC4P1-201ENST00000453177 535 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC073073.1-201ENST00000493920 463 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC010460.2-201ENST00000509054 677 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 TPT1P8-201ENST00000510120 555 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AP001372.4-201ENST00000524889 472 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 OR4V1P-201ENST00000525394 1140 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC093510.2-201ENST00000562820 896 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC233266.2-201ENST00000567067 528 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC096947.1-201ENST00000603233 470 ntBASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX9Q9Y5X1 AC245389.2-201ENST00000616023 576 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms