Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PCDHGC4Q9Y5F7 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDHGC4Q9Y5F7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PCDHGC4Q9Y5F7 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 GNG5P1-201ENST00000255500 204 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 RNA5SP308-201ENST00000362532 115 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 RNA5SP321-201ENST00000362722 111 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 RNU6-216P-201ENST00000363282 104 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 Y_RNA.133-201ENST00000363428 110 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 Y_RNA.159-201ENST00000363674 87 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 RNU6-282P-201ENST00000365357 103 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 RNU6-1318P-201ENST00000365389 103 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 Y_RNA.381-201ENST00000365666 102 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 RNU6-185P-201ENST00000384421 107 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 Y_RNA.579-201ENST00000390939 94 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 FDPSP5-201ENST00000399474 1057 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 MIR1266-201ENST00000408125 84 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 RPS27AP6-201ENST00000427962 448 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 MTND6P18-201ENST00000439477 513 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC023194.1-201ENST00000493084 308 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 POU5F1P7-201ENST00000508759 541 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 MINOS1P4-201ENST00000515470 318 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC011921.2-201ENST00000589465 152 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 CKS1BP3-201ENST00000600888 237 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 SNRPGP17-201ENST00000603780 214 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AL355598.1-201ENST00000604169 202 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AL161734.1-201ENST00000609720 557 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC234782.5-201ENST00000617723 324 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC005899.6-201ENST00000620729 297 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 NCOA4P3-201ENST00000513203 1877 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 FANCD2P2-201ENST00000437591 1400 ntBASIC6.76□□□□□ -1.33
PCDHGC4Q9Y5F7 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHGC4Q9Y5F7 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDHGC4Q9Y5F7 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PCDHGC4Q9Y5F7 AC006378.2-201ENST00000623178 2476 ntBASIC6.75□□□□□ -1.33
PCDHGC4Q9Y5F7 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHGC4Q9Y5F7 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHGC4Q9Y5F7 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHGC4Q9Y5F7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.75□□□□□ -1.33
PCDHGC4Q9Y5F7 AL359195.2-201ENST00000623657 4412 ntBASIC6.75□□□□□ -1.33
PCDHGC4Q9Y5F7 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHGC4Q9Y5F7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms