Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CTDP1Q9Y5B0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC114947.2-201ENST00000565748 2125 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 Y_RNA.436-201ENST00000384097 102 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 MIR937-201ENST00000401271 86 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 GSTA12P-201ENST00000402398 508 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AL356131.1-201ENST00000405826 414 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 RN7SKP126-201ENST00000411143 300 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC093162.1-201ENST00000419682 124 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 UBE2D3P1-201ENST00000436669 444 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC069540.1-201ENST00000446320 988 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AL157884.3-201ENST00000448273 1184 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 Z95152.1-201ENST00000453556 656 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC109462.1-201ENST00000491087 368 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 SUMO1P1-201ENST00000497904 306 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC026414.1-201ENST00000504046 698 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 SNRPCP2-201ENST00000504370 475 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 RPS4XP20-201ENST00000505751 772 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AP003717.3-201ENST00000544832 1180 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 CBX3P2-202ENST00000583365 535 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AL137072.1-201ENST00000603444 466 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC006363.1-201ENST00000603806 463 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC121247.2-201ENST00000604776 136 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC013562.2-201ENST00000611632 603 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 RMST_10.1-201ENST00000616309 154 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AL133370.2-201ENST00000619934 439 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC068870.2-201ENST00000620635 389 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AP003497.2-201ENST00000624220 967 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 OR8B1P-202ENST00000641132 1178 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AL359715.4-201ENST00000606629 1436 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 HSPD1P11-201ENST00000508643 1702 ntBASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CTDP1Q9Y5B0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.41
CTDP1Q9Y5B0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 RNU6-1005P-201ENST00000384519 107 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 ATF1P1-201ENST00000406040 927 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 OR4K12P-201ENST00000406538 961 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC211486.3-201ENST00000412694 621 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 RPS3AP37-201ENST00000419176 745 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 SEPT2P1-201ENST00000419651 180 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AL513175.2-201ENST00000422071 443 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC046176.1-201ENST00000435260 1170 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 RPL12P3-201ENST00000440080 396 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC073648.4-201ENST00000442655 781 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 RPS27P5-201ENST00000444247 244 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 SBDSP1-204ENST00000453858 737 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AL133244.1-201ENST00000456007 258 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC079203.1-201ENST00000487972 404 ntBASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.21□□□□□ -1.42
CTDP1Q9Y5B0 AC090058.1-201ENST00000498788 435 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms