Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 OR56B2P-201ENST00000317102 954 ntBASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 RNU1-14P-201ENST00000362759 152 ntBASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 NPM1P37-201ENST00000403105 874 ntBASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 RNU6ATAC-201ENST00000408749 126 ntBASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 EIF4A1P1-201ENST00000420241 934 ntBASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 DDX39BP2-208ENST00000453923 258 ntBASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 AC007546.2-201ENST00000623996 360 ntBASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 AC012442.3-202ENST00000636742 206 ntBASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 MAPK10-372ENST00000641954 3413 ntBASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.55□□□□□ -1.36
SHANK2Q9UPX8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 AC069157.1-201ENST00000421749 137 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 RPL23AP38-201ENST00000423801 469 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 DEFB109A-201ENST00000482450 265 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 AC146944.2-203ENST00000502493 354 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 AC139495.1-202ENST00000513164 354 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 RNA5SP303-201ENST00000516192 130 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 RNA5SP49-201ENST00000516450 115 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 AL160281.1-201ENST00000605307 311 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 MIR6867-201ENST00000610636 67 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 AC234782.5-201ENST00000617723 324 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 AL356121.2-201ENST00000624715 780 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 AL672167.1-204ENST00000641875 3017 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 TET1P1-201ENST00000426627 2301 ntBASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SHANK2Q9UPX8 AC093578.1-201ENST00000415219 368 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AC018644.1-201ENST00000429934 551 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 VN1R105P-201ENST00000486595 910 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 RNA5SP497-201ENST00000516081 97 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AC012468.1-201ENST00000604888 430 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AC025175.1-201ENST00000606482 759 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 FP325313.1-201ENST00000638228 703 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AL133243.3-201ENST00000617415 3004 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AC233289.1-201ENST00000403700 508 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 RN7SKP235-201ENST00000410662 305 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 RN7SKP167-201ENST00000411047 285 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AL590806.1-201ENST00000415818 853 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 HMGB3P5-201ENST00000428894 612 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AL133547.1-201ENST00000448546 220 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 SNORA74D-201ENST00000516404 141 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 RNA5SP519-201ENST00000516480 119 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AC105233.3-201ENST00000531125 744 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 CCNG2P1-201ENST00000549521 1000 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 HMGB2P1-201ENST00000591146 634 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 TMEM30CP-203ENST00000637814 1035 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AC008013.2-202ENST00000637965 364 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 AC032011.1-201ENST00000611703 1549 ntBASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms