Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC104118.1-201ENST00000607625 1589 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AC067945.1-201ENST00000342609 618 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AL035419.1-201ENST00000397037 564 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 RPS20P14-201ENST00000412545 360 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 UBE2V1P3-201ENST00000439651 417 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AC011753.3-201ENST00000443436 406 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 RPS26P28-201ENST00000470806 348 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AC022795.1-201ENST00000473808 480 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AP002981.1-201ENST00000517692 975 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AL021707.7-201ENST00000607991 416 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AC100847.1-201ENST00000611316 481 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 MIR6891-201ENST00000618788 93 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AC021106.3-201ENST00000623925 531 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 AL049536.1-201ENST00000625043 744 ntBASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS29Q9UBQ0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC017104.4-201ENST00000636283 1592 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 RNU1-15P-201ENST00000353977 144 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 MIR3065-201ENST00000390137 79 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 VN1R8P-201ENST00000407739 893 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 RNU2-50P-201ENST00000410494 143 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 UQCRBP1-201ENST00000421129 336 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC007394.1-201ENST00000421941 531 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC006466.1-201ENST00000438721 289 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC015795.1-201ENST00000513669 327 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AL121834.1-201ENST00000572284 509 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AC133552.5-201ENST00000604266 540 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 MIR6780A-201ENST00000615089 68 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AP005019.3-201ENST00000620418 560 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 MIR7154-201ENST00000620673 73 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AL596275.2-204ENST00000641628 552 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 AL596275.2-206ENST00000641957 626 ntBASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
VPS29Q9UBQ0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 OR4K15-201ENST00000305051 1216 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 RNU1-108P-201ENST00000362556 161 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 RNU6-1263P-201ENST00000384601 106 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 GLULP6-201ENST00000399502 913 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AL139039.2-201ENST00000407436 479 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 NDUFA5P1-201ENST00000433858 341 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 AC114495.1-201ENST00000441274 436 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 HMGB3P9-201ENST00000441799 583 ntBASIC4.22□□□□□ -1.73
VPS29Q9UBQ0 RN7SL610P-201ENST00000463845 291 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms