Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 AC122134.1-201ENST00000565664 1104 ntBASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 AC040174.2-201ENST00000602701 465 ntBASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 AL356274.1-201ENST00000617064 410 ntBASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 AL356490.1-201ENST00000623079 479 ntBASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VIPAS39Q9H9C1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
VIPAS39Q9H9C1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VIPAS39Q9H9C1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
VIPAS39Q9H9C1 AC018529.3-201ENST00000624212 2254 ntBASIC4.71□□□□□ -1.65
VIPAS39Q9H9C1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 MIR621-201ENST00000384919 96 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 RPS23P10-201ENST00000416185 486 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 OR51A6P-201ENST00000418680 1004 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 MTATP6P11-201ENST00000428071 670 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 CFL1P1-202ENST00000432948 411 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AL606490.7-201ENST00000433136 191 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 HMGN1P2-201ENST00000445197 310 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 HMGB1P3-201ENST00000502802 616 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC034244.2-201ENST00000514668 858 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 RNU1-6P-201ENST00000516290 144 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 BUD31P1-201ENST00000521828 359 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 NANOGNBP2-201ENST00000544753 553 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC107016.1-201ENST00000550463 337 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC087888.1-201ENST00000550884 1254 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 RPL23AP97-201ENST00000568955 471 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 OR4H6P-202ENST00000603819 340 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 FO393422.1-201ENST00000603908 708 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC026368.1-201ENST00000614934 690 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 AC073592.7-201ENST00000623659 507 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 OR8A1-204ENST00000642111 1145 ntBASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.71□□□□□ -1.66
VIPAS39Q9H9C1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 RNA5SP307-201ENST00000362863 116 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AL356057.1-202ENST00000402263 756 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 Z97832.1-201ENST00000402490 328 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 GTF2IP5-201ENST00000414608 731 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 MTCYBP29-201ENST00000436327 1006 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AL590762.3-201ENST00000436372 640 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AL163193.1-201ENST00000444895 788 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC017099.1-201ENST00000448261 1028 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 MTND5P8-201ENST00000449817 1083 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AL935212.3-201ENST00000450729 284 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 HMGN2P25-201ENST00000486956 268 ntBASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.7□□□□□ -1.66
VIPAS39Q9H9C1 AC027544.3-201ENST00000535082 757 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms