Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AL359757.1-201ENST00000623176 255 ntBASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 OR52B5P-202ENST00000641118 1110 ntBASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 AL158152.1-201ENST00000602652 1435 ntBASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 ZNF833P-201ENST00000424938 1494 ntBASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.22□□□□□ -1.41
BCAS3Q9H6U6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
BCAS3Q9H6U6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
BCAS3Q9H6U6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.21□□□□□ -1.41
BCAS3Q9H6U6 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.41
BCAS3Q9H6U6 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
BCAS3Q9H6U6 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AL391994.1-201ENST00000254724 282 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 Y_RNA.516-201ENST00000384541 124 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AL133388.1-201ENST00000404509 287 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC023128.2-201ENST00000420880 1223 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AL139148.1-201ENST00000427122 680 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 GTF2IP7-202ENST00000436677 309 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 RBMX2P4-201ENST00000441256 376 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 OR52E3P-201ENST00000452083 936 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 SUMO2P2-201ENST00000456482 255 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 RPL32P9-201ENST00000487963 407 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 RPS6P4-201ENST00000494693 758 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 DSTNP2-201ENST00000504533 515 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC104090.1-201ENST00000506341 1171 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 RN7SKP141-201ENST00000516167 338 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 RN7SKP99-201ENST00000517028 307 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AP000873.5-201ENST00000533906 236 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AL512347.1-201ENST00000566420 503 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 MIR6837-201ENST00000620884 64 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC140479.2-201ENST00000421567 3130 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC012020.1-201ENST00000624541 1728 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 OFD1P17-201ENST00000437639 3018 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC006206.1-201ENST00000544842 3387 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AP000547.3-204ENST00000588548 2523 ntBASIC6.21□□□□□ -1.42
BCAS3Q9H6U6 AC004076.2-201ENST00000620532 3323 ntBASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 RPL10P10-201ENST00000403509 664 ntBASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 RPS26P13-201ENST00000419030 330 ntBASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 AC027644.1-201ENST00000419595 298 ntBASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 MEMO1P4-201ENST00000453590 386 ntBASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 AC011979.1-201ENST00000472300 483 ntBASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 SETP11-201ENST00000473027 690 ntBASIC6.2□□□□□ -1.42
BCAS3Q9H6U6 OR2AO1P-201ENST00000476497 403 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms