Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 RNU1-63P-201ENST00000383902 164 ntBASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 AC004448.2-201ENST00000422360 586 ntBASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 RPL7L1P1-201ENST00000448259 785 ntBASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 AC005008.1-201ENST00000456151 612 ntBASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 AC011005.3-201ENST00000491624 395 ntBASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 AL451049.1-201ENST00000608672 497 ntBASIC5.4□□□□□ -1.54
UPF3BQ9BZI7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.4□□□□□ -1.55
UPF3BQ9BZI7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.4□□□□□ -1.55
UPF3BQ9BZI7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
UPF3BQ9BZI7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
UPF3BQ9BZI7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.55
UPF3BQ9BZI7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
UPF3BQ9BZI7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
UPF3BQ9BZI7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
UPF3BQ9BZI7 VN2R3P-201ENST00000422626 1412 ntBASIC5.4□□□□□ -1.55
UPF3BQ9BZI7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC011503.2-201ENST00000594230 1500 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 NXPH1-205ENST00000602349 1953 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 BMS1P3-201ENST00000372011 932 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC069213.2-201ENST00000420238 366 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC004975.1-201ENST00000428733 208 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC013410.1-201ENST00000436223 1232 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 RPL12P20-201ENST00000475538 479 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC090013.1-201ENST00000485147 480 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 RPL21P129-201ENST00000491732 478 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AK3P4-201ENST00000504283 583 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC111000.3-201ENST00000508057 576 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 MIR4277-201ENST00000578298 84 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC010201.1-201ENST00000605051 540 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC091905.2-201ENST00000623143 306 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC068724.3-201ENST00000625906 87 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC132825.8-201ENST00000640783 297 ntBASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.39□□□□□ -1.55
UPF3BQ9BZI7 AC139769.1-204ENST00000472297 1931 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 MTCO1P15-201ENST00000529569 1526 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 AC108467.2-201ENST00000617640 1597 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 IL6STP1-201ENST00000346911 1020 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 Z98745.1-201ENST00000402553 494 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 RPS27AP7-201ENST00000422792 455 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 KCTD10P1-201ENST00000434203 625 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 ARL4AP3-201ENST00000441452 574 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 TCP11X3P-202ENST00000514289 1254 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 SLC25A36P1-201ENST00000590111 465 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 AC021106.3-201ENST00000623925 531 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 OR2L1P-202ENST00000641567 1023 ntBASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.38□□□□□ -1.55
UPF3BQ9BZI7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms