Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RNA5SP307-201ENST00000362863 116 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 SNORA70F-201ENST00000384142 135 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 OR1F12-201ENST00000402365 945 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AL356968.2-201ENST00000412769 1257 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 UBE2V1P3-201ENST00000439651 417 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AL513533.1-201ENST00000453728 415 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AL672167.3-201ENST00000465951 960 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 RN7SL738P-201ENST00000470264 297 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AC098583.1-201ENST00000480875 255 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AF186190.1-201ENST00000517470 480 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AC008694.2-201ENST00000517591 306 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AC006065.6-201ENST00000625201 545 ntBASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
RSPO3Q9BXY4 AC125257.1-201ENST00000560400 2930 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC067945.1-201ENST00000342609 618 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RNA5SP22-201ENST00000365393 109 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RNU1-44P-201ENST00000384453 163 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 FCF1P5-201ENST00000406490 482 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RN7SKP106-201ENST00000410832 272 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 GSTM3P2-201ENST00000412746 530 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 FTH1P16-201ENST00000435241 552 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 HMGB3P9-201ENST00000441799 583 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC012671.1-201ENST00000451912 203 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RPS29P33-201ENST00000456717 146 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RPL23AP65-201ENST00000475608 468 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RN7SL205P-201ENST00000490174 284 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 OR8G5-201ENST00000524943 1041 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AP001781.1-201ENST00000530977 207 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC008147.3-201ENST00000548666 354 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RN7SL722P-201ENST00000617780 284 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RN7SL565P-201ENST00000618246 284 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC093535.2-201ENST00000624769 2326 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 OR51H2P-202ENST00000641424 3046 ntBASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RSPO3Q9BXY4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC008079.2-201ENST00000623543 20396 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 MFSD8-216ENST00000641147 4009 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 RNA5SP397-201ENST00000391323 118 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms