Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC073111.2-201ENST00000605657 1075 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC008966.2-201ENST00000606157 453 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AL158062.1-201ENST00000619632 745 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 AC080188.3-201ENST00000624842 748 ntBASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCDC28BQ9BUN5 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 RNA5SP455-201ENST00000365190 119 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 RNU6-152P-201ENST00000384037 107 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AMZ2P2-201ENST00000406819 1057 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 RAB9AP4-201ENST00000415230 609 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 MTND4LP14-201ENST00000429447 288 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC245047.2-201ENST00000441060 530 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 TXNP2-201ENST00000443918 295 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 RN7SL717P-201ENST00000478343 297 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 SNRPCP2-201ENST00000504370 475 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 MRPS33P2-201ENST00000507850 322 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 IGLV3-26-201ENST00000520756 302 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 IFITM8P-201ENST00000522529 394 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 OR5M7P-201ENST00000526140 972 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 MTND4LP25-201ENST00000570218 163 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 MIR4691-201ENST00000583764 85 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC091178.1-203ENST00000584586 279 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 MEMO1P5-201ENST00000604810 406 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC005014.3-201ENST00000605985 190 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 AC078899.5-201ENST00000612475 178 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 BMS1P21-201ENST00000634565 365 ntBASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC28BQ9BUN5 OR10AB1P-202ENST00000641219 1686 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC011266.1-201ENST00000624119 3569 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 U3.36-201ENST00000408418 213 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC114755.2-201ENST00000413520 361 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 EIF2S2P3-201ENST00000428356 999 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AL138899.2-201ENST00000439139 499 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 ARL5AP3-201ENST00000439327 386 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 SLC25A18P1-201ENST00000449385 454 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 OR2AO1P-201ENST00000476497 403 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 RPS26P15-201ENST00000488067 348 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 RNU1-6P-201ENST00000516290 144 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 SNORA26.10-201ENST00000516427 141 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC107016.1-201ENST00000550463 337 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 SNORD95-201ENST00000579879 68 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC022726.1-201ENST00000587475 207 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AP001521.2-201ENST00000608772 546 ntBASIC4.54□□□□□ -1.68
CCDC28BQ9BUN5 AC092574.1-201ENST00000609771 420 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms