Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL450992.3-201ENST00000413192 568 ntBASIC5.73□□□□□ -1.49
ABCA3Q99758 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCA3Q99758 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCA3Q99758 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.73□□□□□ -1.49
ABCA3Q99758 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.73□□□□□ -1.49
ABCA3Q99758 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCA3Q99758 AC007546.2-201ENST00000623996 360 ntBASIC5.73□□□□□ -1.49
ABCA3Q99758 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ABCA3Q99758 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ABCA3Q99758 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
ABCA3Q99758 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ABCA3Q99758 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.73□□□□□ -1.49
ABCA3Q99758 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
ABCA3Q99758 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCA3Q99758 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.72□□□□□ -1.49
ABCA3Q99758 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ABCA3Q99758 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ABCA3Q99758 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ABCA3Q99758 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCA3Q99758 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCA3Q99758 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.72□□□□□ -1.49
ABCA3Q99758 MIR483-201ENST00000385070 76 ntBASIC5.72□□□□□ -1.49
ABCA3Q99758 RN7SKP167-201ENST00000411047 285 ntBASIC5.72□□□□□ -1.49
ABCA3Q99758 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.72□□□□□ -1.49
ABCA3Q99758 ARL4AP4-201ENST00000434170 518 ntBASIC5.72□□□□□ -1.49
ABCA3Q99758 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCA3Q99758 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCA3Q99758 RNA5SP446-201ENST00000515955 82 ntBASIC5.72□□□□□ -1.49
ABCA3Q99758 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCA3Q99758 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCA3Q99758 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCA3Q99758 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCA3Q99758 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCA3Q99758 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCA3Q99758 AL603750.1-201ENST00000624216 1717 ntBASIC5.72□□□□□ -1.49
ABCA3Q99758 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCA3Q99758 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCA3Q99758 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCA3Q99758 CASC19-261ENST00000641853 1638 ntBASIC5.72□□□□□ -1.49
ABCA3Q99758 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ABCA3Q99758 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCA3Q99758 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCA3Q99758 RNU4-6P-201ENST00000410804 122 ntBASIC5.71□□□□□ -1.49
ABCA3Q99758 AC062016.2-201ENST00000420950 676 ntBASIC5.71□□□□□ -1.49
ABCA3Q99758 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.71□□□□□ -1.49
ABCA3Q99758 ATP5G1P3-201ENST00000463301 410 ntBASIC5.71□□□□□ -1.49
ABCA3Q99758 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.71□□□□□ -1.49
ABCA3Q99758 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.71□□□□□ -1.49
ABCA3Q99758 ADAM24P-201ENST00000398655 2101 ntBASIC5.71□□□□□ -1.5
ABCA3Q99758 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ABCA3Q99758 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
ABCA3Q99758 AL929601.4-201ENST00000613011 1341 ntBASIC5.71□□□□□ -1.5
ABCA3Q99758 AC093591.2-201ENST00000565254 3843 ntBASIC5.71□□□□□ -1.5
ABCA3Q99758 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCA3Q99758 AL359922.3-201ENST00000624779 1670 ntBASIC5.71□□□□□ -1.5
ABCA3Q99758 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ABCA3Q99758 AC116667.1-201ENST00000604855 2072 ntBASIC5.71□□□□□ -1.5
ABCA3Q99758 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ABCA3Q99758 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ABCA3Q99758 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ABCA3Q99758 AL049781.1-201ENST00000623195 3585 ntBASIC5.71□□□□□ -1.5
ABCA3Q99758 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
ABCA3Q99758 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCA3Q99758 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
ABCA3Q99758 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ABCA3Q99758 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ABCA3Q99758 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.71□□□□□ -1.5
ABCA3Q99758 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCA3Q99758 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ABCA3Q99758 AC007342.8-201ENST00000623278 678 ntBASIC5.71□□□□□ -1.5
ABCA3Q99758 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.7□□□□□ -1.5
ABCA3Q99758 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ABCA3Q99758 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
ABCA3Q99758 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ABCA3Q99758 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.7□□□□□ -1.5
ABCA3Q99758 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ABCA3Q99758 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ABCA3Q99758 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ABCA3Q99758 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ABCA3Q99758 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ABCA3Q99758 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
ABCA3Q99758 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ABCA3Q99758 KRR1P1-201ENST00000419430 803 ntBASIC5.7□□□□□ -1.5
ABCA3Q99758 CDY14P-201ENST00000431260 1014 ntBASIC5.7□□□□□ -1.5
ABCA3Q99758 CDY12P-201ENST00000440679 1015 ntBASIC5.7□□□□□ -1.5
ABCA3Q99758 RPS3AP12-201ENST00000443616 753 ntBASIC5.7□□□□□ -1.5
ABCA3Q99758 CDY13P-201ENST00000445813 1015 ntBASIC5.7□□□□□ -1.5
ABCA3Q99758 CDY23P-201ENST00000451661 1014 ntBASIC5.7□□□□□ -1.5
ABCA3Q99758 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
ABCA3Q99758 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.7□□□□□ -1.5
ABCA3Q99758 RPL23AP97-201ENST00000568955 471 ntBASIC5.7□□□□□ -1.5
ABCA3Q99758 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.7□□□□□ -1.5
ABCA3Q99758 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.7□□□□□ -1.5
ABCA3Q99758 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ABCA3Q99758 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ABCA3Q99758 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ABCA3Q99758 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.7□□□□□ -1.5
ABCA3Q99758 AP001157.1-201ENST00000550837 2339 ntBASIC5.69□□□□□ -1.5
ABCA3Q99758 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ABCA3Q99758 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms