Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 IQCB2P-201ENST00000401788 1633 ntBASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 AP002512.4-202ENST00000641599 4530 ntBASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 SNORA70C-201ENST00000384538 135 ntBASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 MIR23A-201ENST00000385245 73 ntBASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 AL080315.1-201ENST00000406055 466 ntBASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 RNU1-45P-201ENST00000517191 141 ntBASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 AL133268.1-201ENST00000405676 1401 ntBASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP2Q96SN8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 TCP1P3-201ENST00000414406 1498 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 SNORD96B-201ENST00000386148 79 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 CYCSP19-201ENST00000411715 316 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 OR5M7P-201ENST00000526140 972 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 GLRXP2-201ENST00000555594 321 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 RPS26P8-201ENST00000393490 348 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 AL389915.1-201ENST00000422463 466 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 HSPE1P16-201ENST00000426640 348 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 RPL21P89-201ENST00000444021 467 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 AC012123.2-201ENST00000485809 248 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 OR5BC1P-201ENST00000529327 739 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 AC016590.3-201ENST00000611171 753 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 FAM27D1-201ENST00000612308 341 ntBASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK5RAP2Q96SN8 AL133243.3-201ENST00000617415 3004 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 AL513548.1-201ENST00000562904 1724 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 UBTFL3-201ENST00000418934 1024 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 CYP4F29P-201ENST00000420685 446 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 RPS27AP15-201ENST00000447672 466 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 RN7SL303P-201ENST00000469773 251 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 UBTFL6-201ENST00000477929 1024 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 AC099522.1-202ENST00000514718 367 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 HMGB2P1-201ENST00000591146 634 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 BNIP3P22-201ENST00000593399 556 ntBASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP2Q96SN8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 SPRR2C-201ENST00000290702 219 ntBASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 ATP5F1P2-201ENST00000398143 760 ntBASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 AL035696.2-201ENST00000407941 709 ntBASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 RPL23AP38-201ENST00000423801 469 ntBASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 RPL34P6-201ENST00000432390 345 ntBASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 HSFY6P-201ENST00000445573 403 ntBASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 PTMAP3-201ENST00000447474 330 ntBASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 RPL35AP15-201ENST00000468042 339 ntBASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 DEFB109F-201ENST00000491870 277 ntBASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.09□□□□□ -1.59
CDK5RAP2Q96SN8 CCDC58P3-201ENST00000590792 430 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms