Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC096553.1-201ENST00000605169 829 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 AC020634.1-201ENST00000608701 549 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 AC132825.1-201ENST00000463573 2247 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 MTND5P23-201ENST00000430812 1655 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC42Q96M95 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC42Q96M95 RBMY1KP-201ENST00000423480 476 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 AC016724.1-201ENST00000453215 421 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 AC011005.3-201ENST00000491624 395 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 PARP4P3-201ENST00000510265 317 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 NPM1P6-201ENST00000521088 871 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 OR5M2P-201ENST00000529003 936 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 AC018552.1-201ENST00000562099 811 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 MIR4737-201ENST00000583979 81 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 AC005084.1-201ENST00000605160 304 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 MIR6886-201ENST00000619864 61 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC42Q96M95 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC42Q96M95 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC42Q96M95 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC42Q96M95 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC42Q96M95 AC109780.1-201ENST00000451768 1344 ntBASIC4.72□□□□□ -1.65
CCDC42Q96M95 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.71□□□□□ -1.65
CCDC42Q96M95 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC42Q96M95 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 BRAFP1-201ENST00000445336 2703 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC42Q96M95 RHOT1P2-201ENST00000366423 333 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC42Q96M95 MIR659-201ENST00000384963 97 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 MIR93-201ENST00000385024 80 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 GAPDHP49-201ENST00000421421 961 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 PSMD10P3-201ENST00000437000 448 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 PA2G4P6-201ENST00000438325 1197 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 AC069285.2-201ENST00000440210 275 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 SNRPFP2-201ENST00000440710 251 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 AC010469.1-201ENST00000463864 576 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 RN7SL629P-201ENST00000489622 285 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 RFPL4AP3-201ENST00000515267 345 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 OR5M7P-201ENST00000526140 972 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 PDCD5P1-201ENST00000543528 309 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 AL352979.3-201ENST00000553515 247 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 AC124068.1-201ENST00000563131 678 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC42Q96M95 UBE2FP2-201ENST00000566646 462 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 MIR432-201ENST00000606207 94 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 MIR6891-201ENST00000618788 93 ntBASIC4.71□□□□□ -1.66
CCDC42Q96M95 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC42Q96M95 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC42Q96M95 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC42Q96M95 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC42Q96M95 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC42Q96M95 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCDC42Q96M95 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CCDC42Q96M95 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC42Q96M95 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC42Q96M95 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC42Q96M95 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC42Q96M95 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC42Q96M95 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC42Q96M95 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC42Q96M95 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC42Q96M95 GLULP6-201ENST00000399502 913 ntBASIC4.7□□□□□ -1.66
CCDC42Q96M95 MIR298-201ENST00000401212 88 ntBASIC4.7□□□□□ -1.66
CCDC42Q96M95 AL512430.2-201ENST00000406786 339 ntBASIC4.7□□□□□ -1.66
CCDC42Q96M95 RNA5SP104-201ENST00000410989 118 ntBASIC4.7□□□□□ -1.66
CCDC42Q96M95 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC42Q96M95 IPMKP1-201ENST00000425988 855 ntBASIC4.7□□□□□ -1.66
CCDC42Q96M95 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC42Q96M95 AC114495.1-201ENST00000441274 436 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms