Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RN7SKP160-201ENST00000363804 340 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTP4A1Q93096 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTP4A1Q93096 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 RNU1-77P-201ENST00000390868 162 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AL390774.1-201ENST00000411924 246 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC004022.2-201ENST00000413824 193 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC013429.2-201ENST00000418798 781 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC114814.2-201ENST00000419195 485 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTP4A1Q93096 RPL36AP10-201ENST00000421785 322 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 CYCSP6-201ENST00000434498 302 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 RPS29P10-201ENST00000439197 166 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTP4A1Q93096 RPL6P5-201ENST00000445678 828 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC096992.1-201ENST00000459808 709 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 OR2AO1P-201ENST00000476497 403 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 RPL7P6-201ENST00000480903 738 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 OR5H4P-201ENST00000510851 923 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 RPL7L1P4-201ENST00000513004 707 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC012400.1-201ENST00000518452 381 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC134698.5-201ENST00000519444 336 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 RPL23AP53-201ENST00000521854 457 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 RN7SL176P-201ENST00000580352 264 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 OR6R2P-201ENST00000609216 300 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC004948.1-201ENST00000609858 672 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC024595.1-201ENST00000623088 387 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 MIR6715B-201ENST00000637172 77 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTP4A1Q93096 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 AC046144.1-201ENST00000478559 1853 ntBASIC4.6□□□□□ -1.67
PTP4A1Q93096 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
PTP4A1Q93096 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTP4A1Q93096 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PTP4A1Q93096 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTP4A1Q93096 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTP4A1Q93096 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PTP4A1Q93096 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 AC023128.2-201ENST00000420880 1223 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 AC093655.2-201ENST00000425735 631 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 OR5AW1P-201ENST00000426334 1006 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 RWDD4P2-201ENST00000426392 563 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 ETF1P3-201ENST00000430422 1160 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PTP4A1Q93096 EIF2S2P5-201ENST00000457635 968 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTP4A1Q93096 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 RWDD4P1-201ENST00000488019 565 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 AL035404.1-201ENST00000497982 568 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PTP4A1Q93096 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 RNA5SP362-201ENST00000516048 118 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 RN7SKP283-201ENST00000517197 270 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PTP4A1Q93096 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 ZNF92P2-201ENST00000600543 1059 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 AF230666.2-201ENST00000602328 725 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 AP005432.2-201ENST00000608162 586 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 OR2BH1P-201ENST00000608850 864 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 U6.107-201ENST00000637108 79 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 OR52B5P-202ENST00000641118 1110 ntBASIC4.59□□□□□ -1.67
PTP4A1Q93096 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.59□□□□□ -1.67
PTP4A1Q93096 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms