Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.16□□□□□ -1.42
ERCC4Q92889 VDAC2P4-201ENST00000452925 711 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 HSPE1P22-201ENST00000456856 327 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.16□□□□□ -1.42
ERCC4Q92889 RPF2P2-201ENST00000504693 896 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC4Q92889 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AL671862.1-201ENST00000515851 349 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 RNU6-513P-201ENST00000516104 104 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 MTCO3P15-201ENST00000526563 574 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC4Q92889 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 RBM22P12-201ENST00000567098 1255 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC4Q92889 RN7SL290P-201ENST00000578661 300 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 SNORD39.2-201ENST00000579995 76 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AL583856.2-201ENST00000606298 543 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AP004607.9-201ENST00000618202 316 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AC026585.1-201ENST00000619582 524 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 AC092608.3-201ENST00000625017 386 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC073869.8-201ENST00000641806 335 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC111188.2-201ENST00000529697 1387 ntBASIC6.16□□□□□ -1.42
ERCC4Q92889 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.16□□□□□ -1.42
ERCC4Q92889 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC4Q92889 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC4Q92889 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
ERCC4Q92889 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ERCC4Q92889 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC4Q92889 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC6.15□□□□□ -1.42
ERCC4Q92889 ADAM5-202ENST00000399789 1942 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
ERCC4Q92889 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ERCC4Q92889 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.15□□□□□ -1.42
ERCC4Q92889 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC4Q92889 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.15□□□□□ -1.42
ERCC4Q92889 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.15□□□□□ -1.42
ERCC4Q92889 RNU6-353P-201ENST00000364266 108 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 SNORA40.2-201ENST00000390847 128 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 OR7E101P-201ENST00000400428 513 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC4Q92889 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC4Q92889 AL031779.1-201ENST00000415663 330 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.15□□□□□ -1.42
ERCC4Q92889 AC246680.2-201ENST00000422106 389 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.15□□□□□ -1.42
ERCC4Q92889 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC4Q92889 AC093716.1-201ENST00000435923 377 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC4Q92889 FGF7P5-201ENST00000441829 291 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.15□□□□□ -1.42
ERCC4Q92889 AP006222.1-205ENST00000450734 457 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 CALM1P2-201ENST00000452941 448 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 AL133477.1-201ENST00000457472 514 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 ACA64.1-201ENST00000459171 127 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 MTND4LP3-201ENST00000468320 276 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC4Q92889 EIF3LP3-201ENST00000495197 822 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 RNU6-1308P-201ENST00000516817 103 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 SNORA70.20-201ENST00000516848 126 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.15□□□□□ -1.42
ERCC4Q92889 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC4Q92889 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC4Q92889 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC4Q92889 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC4Q92889 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
ERCC4Q92889 AL158163.2-201ENST00000619110 700 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.15□□□□□ -1.42
ERCC4Q92889 AC129915.3-201ENST00000634128 948 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 CASC19-222ENST00000641321 1173 ntBASIC6.15□□□□□ -1.42
ERCC4Q92889 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ERCC4Q92889 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
ERCC4Q92889 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ERCC4Q92889 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
ERCC4Q92889 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
ERCC4Q92889 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ERCC4Q92889 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ERCC4Q92889 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC4Q92889 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.14□□□□□ -1.43
ERCC4Q92889 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ERCC4Q92889 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC4Q92889 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC4Q92889 RNU6-1263P-201ENST00000384601 106 ntBASIC6.14□□□□□ -1.43
ERCC4Q92889 MT-TP-201ENST00000387461 68 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms