Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 OR2AM1P-201ENST00000422137 422 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 LINC02210-201ENST00000444561 288 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC068135.1-201ENST00000446164 246 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 MTND1P33-201ENST00000446251 917 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC244505.3-201ENST00000454598 187 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 RPL7AP52-201ENST00000458096 790 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 RN7SL738P-201ENST00000470264 297 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 SNRPCP3-201ENST00000474888 476 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 RPL7P16-201ENST00000479738 738 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 LRRC6P1-201ENST00000532188 885 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 MIR4691-201ENST00000583764 85 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 RN7SL52P-201ENST00000584271 284 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 MIR7973-1-201ENST00000614683 76 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 RN7SL722P-201ENST00000617780 284 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 RN7SL565P-201ENST00000618246 284 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AL137100.1-201ENST00000556703 1620 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AP005435.3-201ENST00000531260 3198 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC012618.3-205ENST00000637896 1496 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 IRF5P1-201ENST00000504852 2164 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 IGKV7-3-201ENST00000357453 298 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 NUDT19P3-201ENST00000404698 555 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC016397.1-201ENST00000412463 242 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 RPS7P9-201ENST00000414704 586 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 MTND4P3-201ENST00000417829 541 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 DDX39BP1-205ENST00000422507 192 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC092648.1-201ENST00000425870 423 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 FTLP19-201ENST00000433300 394 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 USP9YP24-201ENST00000434374 697 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 PRPF38AP2-201ENST00000438179 851 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC073465.2-201ENST00000440938 498 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 ELOCP13-201ENST00000443934 329 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 USP9YP17-201ENST00000444617 696 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 CDC42P1-201ENST00000456658 548 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 SNORD11.1-201ENST00000459482 85 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 RNU7-140P-201ENST00000459546 60 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 RPL21P131-201ENST00000497298 483 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC023050.1-201ENST00000498198 304 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC098862.1-201ENST00000504991 413 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC021106.1-201ENST00000509020 1058 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC008565.1-201ENST00000509046 885 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 PRELID3BP4-201ENST00000515476 571 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 EEF1A1P37-201ENST00000522748 715 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 GSTP1P1-201ENST00000548078 319 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 POLR2KP1-201ENST00000553226 168 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC025857.2-201ENST00000602711 238 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 LSM1P2-201ENST00000604911 322 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 uc_338.18-201ENST00000615451 175 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms