Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC112Q8NEF3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 NCLP2-201ENST00000416078 1462 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 OR52B1P-201ENST00000316506 909 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 RNA5SP513-201ENST00000364648 118 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 SNORA51.8-201ENST00000384234 132 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 GJA6P-201ENST00000415117 1042 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 CDY14P-201ENST00000431260 1014 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 CDY12P-201ENST00000440679 1015 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 CDY13P-201ENST00000445813 1015 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 TRY2P-201ENST00000448860 689 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 CDY23P-201ENST00000451661 1014 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 RPS3AP53-201ENST00000454716 778 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 CCDC75P1-201ENST00000469247 791 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 PARP4P3-201ENST00000510265 317 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 OR5AZ1P-201ENST00000527448 943 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AC018552.1-201ENST00000562099 811 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AC103792.1-201ENST00000603591 919 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AC133552.5-201ENST00000604266 540 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AL391358.1-201ENST00000605342 190 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 MIR4727-201ENST00000622232 55 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AC091953.3-201ENST00000623220 236 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AC112694.2-201ENST00000623697 768 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AL356121.2-201ENST00000624715 780 ntBASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CCDC112Q8NEF3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
CCDC112Q8NEF3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.96□□□□□ -1.61
CCDC112Q8NEF3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.96□□□□□ -1.61
CCDC112Q8NEF3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.96□□□□□ -1.61
CCDC112Q8NEF3 CASC19-255ENST00000641733 1385 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 RPA2P2-201ENST00000419698 796 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 RPS12P5-201ENST00000423449 371 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 NIPA2P1-201ENST00000426223 976 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 AL049745.1-201ENST00000433953 286 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 RPL31P44-201ENST00000447680 377 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 VN1R32P-201ENST00000452234 905 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 RPL23AP2-201ENST00000471227 466 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 AC140172.1-201ENST00000502928 141 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 VWA8P1-201ENST00000510889 176 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 AC110775.1-201ENST00000513721 462 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 AL358913.1-201ENST00000554342 121 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 AC090181.2-201ENST00000602975 672 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 AC097504.1-201ENST00000515103 2415 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 NXPH1-205ENST00000602349 1953 ntBASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC112Q8NEF3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AC010132.2-201ENST00000295493 1043 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 RNA5SP307-201ENST00000362863 116 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 RN7SKP149-201ENST00000363008 344 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 MIR137-201ENST00000385223 102 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 Z98745.1-201ENST00000402553 494 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 RPS4XP9-201ENST00000405151 780 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AL034379.1-201ENST00000423216 253 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AL360081.1-201ENST00000428299 555 ntBASIC4.95□□□□□ -1.62
CCDC112Q8NEF3 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms