Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 SULT1C2P2-201ENST00000562517 294 ntBASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 AC024940.4-201ENST00000605507 246 ntBASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AC233968.1-201ENST00000611212 1300 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 RNA5SP397-201ENST00000391323 118 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AL121834.1-202ENST00000404494 277 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 CEACAMP8-201ENST00000413902 580 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 RPL23AP25-201ENST00000430973 463 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AL049745.1-201ENST00000433953 286 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AL359265.2-201ENST00000434367 631 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 YWHAZP2-201ENST00000440317 728 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 APOOP2-201ENST00000461561 539 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 RPL7AP28-201ENST00000464513 571 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 RPL12P20-201ENST00000475538 479 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 TRBV8-1-201ENST00000481590 279 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AC027455.1-201ENST00000574104 594 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 RN7SL690P-201ENST00000582087 240 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AL158062.1-201ENST00000619632 745 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AC091905.2-201ENST00000623143 306 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 AC074029.4-201ENST00000624796 1859 ntBASIC5.05□□□□□ -1.6
CCDC65Q8IXS2 HSPA8P17-201ENST00000427029 1382 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AL049697.2-201ENST00000403708 294 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AL139128.1-201ENST00000413921 941 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 RAD23BP1-201ENST00000421404 1227 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 RPS12P10-201ENST00000427031 377 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AL772161.1-201ENST00000439130 476 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 RPL23AP93-201ENST00000440847 484 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 RPL10P17-201ENST00000453852 316 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 ATP5G1P3-201ENST00000463301 410 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AP001960.1-201ENST00000506494 658 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC022616.2-201ENST00000523185 300 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 RPL21P7-201ENST00000557463 483 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 BNIP3P32-201ENST00000600015 554 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 RPL7P50-201ENST00000600588 727 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 Mico1.1-201ENST00000611698 204 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC009237.17-201ENST00000618111 748 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 AC067931.1-201ENST00000624190 671 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 MAPK10-304ENST00000641341 3984 ntBASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC65Q8IXS2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC65Q8IXS2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms