Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 7SK.10-201ENST00000621414 298 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 MIR1302-1-201ENST00000637932 143 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 SAGE3P-201ENST00000619800 1635 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 OFD1P17-201ENST00000437639 3018 ntBASIC5.88□□□□□ -1.47
ATG4DQ86TL0 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
ATG4DQ86TL0 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AL157831.2-201ENST00000564681 3095 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 RNU6-433P-201ENST00000363216 104 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 Y_RNA.459-201ENST00000384251 102 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC245036.1-201ENST00000391727 309 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 BX295541.1-201ENST00000417774 250 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC093084.1-201ENST00000424233 687 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 VDAC1P6-201ENST00000430062 855 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 HMGB1P45-201ENST00000435986 653 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 ACTR3P2-201ENST00000439585 1257 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 COL11A2P1-205ENST00000441798 676 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 VN1R38P-201ENST00000450265 887 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 OR52E7P-201ENST00000452394 933 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 SNRPFP4-201ENST00000456366 242 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 SNX18P26-201ENST00000458433 740 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC106822.1-201ENST00000502647 526 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 HMGB1P29-201ENST00000505659 499 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC104108.1-201ENST00000509930 412 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 GUSBP9-201ENST00000510138 584 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 CYP4F27P-201ENST00000514557 494 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC109635.6-201ENST00000525487 1113 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 NIFKP8-201ENST00000560500 874 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC233702.7-202ENST00000582941 211 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC007687.1-201ENST00000602704 304 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC136443.5-201ENST00000603741 370 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AL355598.1-201ENST00000604169 202 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC009779.8-202ENST00000607990 932 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC105429.2-201ENST00000610567 517 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC006504.8-201ENST00000621046 635 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC005858.4-201ENST00000623191 700 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 AC011815.3-201ENST00000624194 473 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.87□□□□□ -1.47
ATG4DQ86TL0 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4DQ86TL0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 287.6 ms