Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 NMNAT1P1-201ENST00000554095 876 ntBASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 AL133338.2-201ENST00000604292 736 ntBASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 AC005899.6-201ENST00000620729 297 ntBASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 AC034229.6-201ENST00000623704 224 ntBASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 AL512353.3-201ENST00000417517 1326 ntBASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
LYSMD3Q7Z3D4 PABPC1P8-201ENST00000452851 2086 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 MTCO1P12-201ENST00000414273 1543 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC127070.3-201ENST00000503695 3263 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 RNU6-223P-201ENST00000362830 107 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 RNU6-582P-201ENST00000362989 107 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 RNU6-98P-201ENST00000384173 107 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 MT-TG-201ENST00000387429 68 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AL450338.1-201ENST00000407987 512 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 RNU4-61P-201ENST00000411243 107 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 RPLP1P10-201ENST00000413972 339 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 MTATP6P18-201ENST00000417994 673 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 BEND7P1-201ENST00000422058 457 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AL158073.1-201ENST00000426848 1104 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 LSM1P1-201ENST00000438629 273 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AL354714.5-201ENST00000450131 590 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 CECR9-201ENST00000453421 199 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 BTF3P5-201ENST00000457252 467 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 RN7SL834P-201ENST00000461450 286 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC083806.1-201ENST00000468934 316 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC135999.1-201ENST00000478962 479 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AF213884.1-201ENST00000488102 463 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC131392.1-201ENST00000506490 633 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC138866.2-201ENST00000508650 584 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 GUSBP9-201ENST00000510138 584 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 OR5D2P-201ENST00000524390 911 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC027667.1-201ENST00000545814 304 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC023310.2-201ENST00000553844 547 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AL117187.1-201ENST00000555482 181 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 FRG2DP-202ENST00000566967 323 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AP001180.3-201ENST00000582221 145 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC010525.2-201ENST00000590920 195 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 DPPA3P3-201ENST00000603842 430 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC140479.4-205ENST00000636339 820 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 AC025574.1-201ENST00000554784 1653 ntBASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LYSMD3Q7Z3D4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
LYSMD3Q7Z3D4 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
LYSMD3Q7Z3D4 AC062029.1-202ENST00000606164 3651 ntBASIC6.91□□□□□ -1.3
LYSMD3Q7Z3D4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
LYSMD3Q7Z3D4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LYSMD3Q7Z3D4 AL512329.1-201ENST00000404600 1592 ntBASIC6.91□□□□□ -1.3
LYSMD3Q7Z3D4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms