Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 CASC19-206ENST00000641028 1430 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 RNA5SP477-201ENST00000362639 119 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 Y_RNA.465-201ENST00000384293 102 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 SNORD56.6-201ENST00000384569 71 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 RN7SKP222-201ENST00000410651 315 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 RN7SKP182-201ENST00000410772 298 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 QRSL1P2-201ENST00000418582 964 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 BX323845.3-201ENST00000428215 527 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC005345.1-201ENST00000431868 217 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 GSTA7P-201ENST00000438425 448 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC092393.1-201ENST00000439625 742 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 FHP1-201ENST00000442741 703 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 MTND1P29-201ENST00000448112 647 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 DNAJC19P8-201ENST00000452887 259 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AL133477.1-201ENST00000457472 514 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AL049874.2-201ENST00000492636 288 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC009120.1-201ENST00000493458 473 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 LSM3P4-201ENST00000502948 309 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 RPF2P2-201ENST00000504693 896 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 OR5H4P-201ENST00000510851 923 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC091912.1-201ENST00000511351 248 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC098976.1-201ENST00000513014 541 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 Y_RNA.667-201ENST00000516212 107 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC090819.1-201ENST00000523800 1111 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 TRIM51DP-201ENST00000529746 596 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC124293.1-201ENST00000530034 493 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 NBEAP1-201ENST00000554452 979 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC090888.1-201ENST00000561335 1141 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC002310.3-201ENST00000569728 723 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AP005136.1-201ENST00000579765 429 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 H3F3BP2-201ENST00000583907 357 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC012557.2-201ENST00000605919 418 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AL359091.2-201ENST00000609303 556 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC138965.3-201ENST00000623875 498 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 MFSD8-245ENST00000641743 948 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 NSRP1P1-201ENST00000444067 1693 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AL022322.2-201ENST00000624072 20397 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC053481.2-202ENST00000582394 1500 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AL034549.2-201ENST00000618285 3373 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC100871.1-201ENST00000507871 1456 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 AL137100.1-201ENST00000556703 1620 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 OR9K1P-201ENST00000326513 941 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 RNU1-150P-201ENST00000362491 162 ntBASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCHD4Q6ZW05 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 299.4 ms