Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC091932.2-201ENST00000623014 291 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.8□□□□□ -1.64
LTBQ06643 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.8□□□□□ -1.64
LTBQ06643 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LTBQ06643 AC073136.1-201ENST00000449426 2884 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC011755.1-201ENST00000623763 2049 ntBASIC4.8□□□□□ -1.64
LTBQ06643 AC012618.3-205ENST00000637896 1496 ntBASIC4.8□□□□□ -1.64
LTBQ06643 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LTBQ06643 AC003985.2-201ENST00000562268 1669 ntBASIC4.8□□□□□ -1.64
LTBQ06643 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
LTBQ06643 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.79□□□□□ -1.64
LTBQ06643 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 AC104623.2-202ENST00000623477 4002 ntBASIC4.79□□□□□ -1.64
LTBQ06643 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LTBQ06643 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.79□□□□□ -1.64
LTBQ06643 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.79□□□□□ -1.64
LTBQ06643 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 RAD1P1-201ENST00000231383 813 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AC005294.1-201ENST00000355509 281 ntBASIC4.79□□□□□ -1.64
LTBQ06643 RNU6-252P-201ENST00000363232 107 ntBASIC4.79□□□□□ -1.64
LTBQ06643 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 RNU6-1005P-201ENST00000384519 107 ntBASIC4.79□□□□□ -1.64
LTBQ06643 CYB5AP4-201ENST00000396692 399 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AC013442.1-201ENST00000397347 228 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AC119751.3-201ENST00000399720 670 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AL109941.1-201ENST00000401925 229 ntBASIC4.79□□□□□ -1.64
LTBQ06643 TATDN1P1-201ENST00000414123 891 ntBASIC4.79□□□□□ -1.64
LTBQ06643 RPS24P7-201ENST00000416921 246 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AC009518.2-201ENST00000418056 731 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 COX6CP17-201ENST00000421389 185 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AC245028.1-201ENST00000423259 256 ntBASIC4.79□□□□□ -1.64
LTBQ06643 BX119904.4-201ENST00000424402 301 ntBASIC4.79□□□□□ -1.64
LTBQ06643 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 OR52B5P-201ENST00000435337 951 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 SNRPFP2-201ENST00000440710 251 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.79□□□□□ -1.64
LTBQ06643 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 MTND6P5-201ENST00000448266 512 ntBASIC4.79□□□□□ -1.64
LTBQ06643 RAB28P3-201ENST00000448325 597 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 RSL24D1P3-201ENST00000449255 495 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AC104634.1-201ENST00000452720 462 ntBASIC4.79□□□□□ -1.64
LTBQ06643 RPL7P45-201ENST00000455851 743 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AC007537.2-201ENST00000472093 511 ntBASIC4.79□□□□□ -1.64
LTBQ06643 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.79□□□□□ -1.64
LTBQ06643 RN7SL481P-201ENST00000477764 299 ntBASIC4.79□□□□□ -1.64
LTBQ06643 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 EIF3KP3-201ENST00000514461 639 ntBASIC4.79□□□□□ -1.64
LTBQ06643 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.79□□□□□ -1.64
LTBQ06643 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.79□□□□□ -1.64
LTBQ06643 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.79□□□□□ -1.64
LTBQ06643 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LTBQ06643 CYB5AP5-201ENST00000549779 389 ntBASIC4.79□□□□□ -1.64
LTBQ06643 ZNF321P-202ENST00000550843 495 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.79□□□□□ -1.64
LTBQ06643 MTCYBP13-201ENST00000578634 1093 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AC011840.5-201ENST00000582125 771 ntBASIC4.79□□□□□ -1.64
LTBQ06643 RN7SL52P-201ENST00000584271 284 ntBASIC4.79□□□□□ -1.64
LTBQ06643 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LTBQ06643 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.79□□□□□ -1.64
LTBQ06643 AC126915.2-201ENST00000610957 190 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.79□□□□□ -1.64
LTBQ06643 RN7SL722P-201ENST00000617780 284 ntBASIC4.79□□□□□ -1.64
LTBQ06643 RN7SL565P-201ENST00000618246 284 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.79□□□□□ -1.64
LTBQ06643 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LTBQ06643 AC091953.3-201ENST00000623220 236 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AP002799.1-201ENST00000623552 423 ntBASIC4.79□□□□□ -1.64
LTBQ06643 AP002505.2-201ENST00000623585 696 ntBASIC4.79□□□□□ -1.64
LTBQ06643 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.79□□□□□ -1.64
LTBQ06643 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.79□□□□□ -1.64
LTBQ06643 OR52B5P-202ENST00000641118 1110 ntBASIC4.79□□□□□ -1.64
LTBQ06643 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LTBQ06643 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.79□□□□□ -1.64
LTBQ06643 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
LTBQ06643 OR9K1P-202ENST00000641111 3217 ntBASIC4.79□□□□□ -1.64
LTBQ06643 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LTBQ06643 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms