Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LSM6P62312 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.06□□□□□ -1.76
LSM6P62312 BRD9P1-201ENST00000529855 560 ntBASIC4.06□□□□□ -1.76
LSM6P62312 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.06□□□□□ -1.76
LSM6P62312 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.06□□□□□ -1.76
LSM6P62312 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.06□□□□□ -1.76
LSM6P62312 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.06□□□□□ -1.76
LSM6P62312 UBE2FP2-201ENST00000566646 462 ntBASIC4.06□□□□□ -1.76
LSM6P62312 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.06□□□□□ -1.76
LSM6P62312 MIR3934-201ENST00000579806 107 ntBASIC4.06□□□□□ -1.76
LSM6P62312 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.06□□□□□ -1.76
LSM6P62312 RPL26P30-202ENST00000602923 645 ntBASIC4.06□□□□□ -1.76
LSM6P62312 AC013244.1-201ENST00000604279 193 ntBASIC4.06□□□□□ -1.76
LSM6P62312 AC090510.2-201ENST00000617465 629 ntBASIC4.06□□□□□ -1.76
LSM6P62312 MIR6853-201ENST00000619642 74 ntBASIC4.06□□□□□ -1.76
LSM6P62312 U3.53-201ENST00000628922 216 ntBASIC4.06□□□□□ -1.76
LSM6P62312 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LSM6P62312 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.06□□□□□ -1.76
LSM6P62312 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.06□□□□□ -1.76
LSM6P62312 AC092435.4-201ENST00000623012 4159 ntBASIC4.06□□□□□ -1.76
LSM6P62312 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.06□□□□□ -1.76
LSM6P62312 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
LSM6P62312 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LSM6P62312 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.06□□□□□ -1.76
LSM6P62312 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LSM6P62312 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LSM6P62312 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM6P62312 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM6P62312 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.05□□□□□ -1.76
LSM6P62312 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 SNORA71.2-201ENST00000364941 134 ntBASIC4.05□□□□□ -1.76
LSM6P62312 FCF1P5-201ENST00000406490 482 ntBASIC4.05□□□□□ -1.76
LSM6P62312 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 RPL6P29-201ENST00000414863 865 ntBASIC4.05□□□□□ -1.76
LSM6P62312 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.05□□□□□ -1.76
LSM6P62312 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.05□□□□□ -1.76
LSM6P62312 MTND2P2-201ENST00000434633 945 ntBASIC4.05□□□□□ -1.76
LSM6P62312 UBE2V2P4-201ENST00000447495 259 ntBASIC4.05□□□□□ -1.76
LSM6P62312 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM6P62312 RPS3AP53-201ENST00000454716 778 ntBASIC4.05□□□□□ -1.76
LSM6P62312 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.05□□□□□ -1.76
LSM6P62312 RNA5SP446-201ENST00000515955 82 ntBASIC4.05□□□□□ -1.76
LSM6P62312 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM6P62312 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.05□□□□□ -1.76
LSM6P62312 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.05□□□□□ -1.76
LSM6P62312 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 BNIP3P32-201ENST00000600015 554 ntBASIC4.05□□□□□ -1.76
LSM6P62312 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM6P62312 VN1R81P-201ENST00000602085 372 ntBASIC4.05□□□□□ -1.76
LSM6P62312 AC098935.2-201ENST00000604222 466 ntBASIC4.05□□□□□ -1.76
LSM6P62312 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.05□□□□□ -1.76
LSM6P62312 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM6P62312 AL121873.1-201ENST00000616013 524 ntBASIC4.05□□□□□ -1.76
LSM6P62312 AC005086.4-201ENST00000623065 213 ntBASIC4.05□□□□□ -1.76
LSM6P62312 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM6P62312 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 AL391684.1-202ENST00000641293 1636 ntBASIC4.05□□□□□ -1.76
LSM6P62312 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM6P62312 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.05□□□□□ -1.76
LSM6P62312 AC092079.1-201ENST00000558620 1985 ntBASIC4.05□□□□□ -1.76
LSM6P62312 AL049555.1-201ENST00000562834 1933 ntBASIC4.05□□□□□ -1.76
LSM6P62312 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 KARSP3-201ENST00000571212 1504 ntBASIC4.05□□□□□ -1.76
LSM6P62312 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM6P62312 AC132825.1-201ENST00000463573 2247 ntBASIC4.05□□□□□ -1.76
LSM6P62312 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM6P62312 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
LSM6P62312 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
LSM6P62312 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LSM6P62312 RNA5SP87-201ENST00000384155 118 ntBASIC4.04□□□□□ -1.76
LSM6P62312 MIR195-201ENST00000385194 87 ntBASIC4.04□□□□□ -1.76
LSM6P62312 SNORD96B-201ENST00000386148 79 ntBASIC4.04□□□□□ -1.76
LSM6P62312 RNA5SP105-201ENST00000391123 113 ntBASIC4.04□□□□□ -1.76
LSM6P62312 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM6P62312 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM6P62312 RPS26P13-201ENST00000419030 330 ntBASIC4.04□□□□□ -1.76
LSM6P62312 AC022022.1-201ENST00000430304 178 ntBASIC4.04□□□□□ -1.76
LSM6P62312 RPL23AP25-201ENST00000430973 463 ntBASIC4.04□□□□□ -1.76
LSM6P62312 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM6P62312 IFNWP4-201ENST00000453148 294 ntBASIC4.04□□□□□ -1.76
LSM6P62312 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM6P62312 AC092324.1-201ENST00000468671 324 ntBASIC4.04□□□□□ -1.76
LSM6P62312 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM6P62312 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 AC007016.1-201ENST00000512110 244 ntBASIC4.04□□□□□ -1.76
LSM6P62312 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM6P62312 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM6P62312 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM6P62312 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM6P62312 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms