Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL121877.1-201ENST00000453704 622 ntBASIC4.03□□□□□ -1.76
ACTBP60709 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.03□□□□□ -1.76
ACTBP60709 RN7SL177P-201ENST00000476596 299 ntBASIC4.03□□□□□ -1.76
ACTBP60709 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.03□□□□□ -1.76
ACTBP60709 AC025164.1-201ENST00000496249 478 ntBASIC4.03□□□□□ -1.76
ACTBP60709 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.03□□□□□ -1.76
ACTBP60709 COX6B1P5-201ENST00000509843 249 ntBASIC4.03□□□□□ -1.76
ACTBP60709 PPBPP1-201ENST00000510807 373 ntBASIC4.03□□□□□ -1.76
ACTBP60709 RN7SKP66-201ENST00000516681 231 ntBASIC4.03□□□□□ -1.76
ACTBP60709 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.03□□□□□ -1.76
ACTBP60709 OR7E128P-201ENST00000532736 1024 ntBASIC4.03□□□□□ -1.76
ACTBP60709 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.03□□□□□ -1.76
ACTBP60709 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.03□□□□□ -1.76
ACTBP60709 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.03□□□□□ -1.76
ACTBP60709 AL049839.1-201ENST00000556151 657 ntBASIC4.03□□□□□ -1.76
ACTBP60709 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.03□□□□□ -1.76
ACTBP60709 AC209154.1-201ENST00000582156 337 ntBASIC4.03□□□□□ -1.76
ACTBP60709 NPM1P45-201ENST00000583151 559 ntBASIC4.03□□□□□ -1.76
ACTBP60709 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.03□□□□□ -1.76
ACTBP60709 AC006116.3-201ENST00000592968 361 ntBASIC4.03□□□□□ -1.76
ACTBP60709 AC009163.6-201ENST00000612367 342 ntBASIC4.03□□□□□ -1.76
ACTBP60709 AL512624.1-201ENST00000613638 469 ntBASIC4.03□□□□□ -1.76
ACTBP60709 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.03□□□□□ -1.76
ACTBP60709 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 AL355852.1-201ENST00000454081 1771 ntBASIC4.03□□□□□ -1.76
ACTBP60709 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ACTBP60709 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ACTBP60709 C4BPAP1-201ENST00000415474 1893 ntBASIC4.03□□□□□ -1.77
ACTBP60709 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.02□□□□□ -1.77
ACTBP60709 CR383656.5-201ENST00000547616 1340 ntBASIC4.02□□□□□ -1.77
ACTBP60709 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ACTBP60709 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ACTBP60709 MIR448-201ENST00000362131 111 ntBASIC4.02□□□□□ -1.77
ACTBP60709 RN7SKP115-201ENST00000363177 317 ntBASIC4.02□□□□□ -1.77
ACTBP60709 RNA5SP455-201ENST00000365190 119 ntBASIC4.02□□□□□ -1.77
ACTBP60709 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ACTBP60709 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ACTBP60709 SNORA70-201ENST00000384436 135 ntBASIC4.02□□□□□ -1.77
ACTBP60709 RNU6-225P-201ENST00000384613 103 ntBASIC4.02□□□□□ -1.77
ACTBP60709 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.02□□□□□ -1.77
ACTBP60709 RNA5SP239-201ENST00000410218 129 ntBASIC4.02□□□□□ -1.77
ACTBP60709 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.02□□□□□ -1.77
ACTBP60709 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.02□□□□□ -1.77
ACTBP60709 AC093084.1-201ENST00000424233 687 ntBASIC4.02□□□□□ -1.77
ACTBP60709 RPL23AP4-201ENST00000427757 463 ntBASIC4.02□□□□□ -1.77
ACTBP60709 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.02□□□□□ -1.77
ACTBP60709 CYCSP11-201ENST00000436426 315 ntBASIC4.02□□□□□ -1.77
ACTBP60709 VN1R96P-201ENST00000446052 858 ntBASIC4.02□□□□□ -1.77
ACTBP60709 RPL7P31-201ENST00000450192 724 ntBASIC4.02□□□□□ -1.77
ACTBP60709 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.02□□□□□ -1.77
ACTBP60709 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.02□□□□□ -1.77
ACTBP60709 AC090114.3-201ENST00000479267 829 ntBASIC4.02□□□□□ -1.77
ACTBP60709 AC025445.1-201ENST00000502728 300 ntBASIC4.02□□□□□ -1.77
ACTBP60709 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.02□□□□□ -1.77
ACTBP60709 RNA5SP154-201ENST00000516193 111 ntBASIC4.02□□□□□ -1.77
ACTBP60709 AC008694.2-201ENST00000517591 306 ntBASIC4.02□□□□□ -1.77
ACTBP60709 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.02□□□□□ -1.77
ACTBP60709 OR5AZ1P-201ENST00000527448 943 ntBASIC4.02□□□□□ -1.77
ACTBP60709 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.02□□□□□ -1.77
ACTBP60709 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.02□□□□□ -1.77
ACTBP60709 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.02□□□□□ -1.77
ACTBP60709 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.02□□□□□ -1.77
ACTBP60709 AC068714.1-201ENST00000559623 800 ntBASIC4.02□□□□□ -1.77
ACTBP60709 MIR3691-201ENST00000578066 90 ntBASIC4.02□□□□□ -1.77
ACTBP60709 MIR4716-201ENST00000579628 84 ntBASIC4.02□□□□□ -1.77
ACTBP60709 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.02□□□□□ -1.77
ACTBP60709 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.02□□□□□ -1.77
ACTBP60709 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.02□□□□□ -1.77
ACTBP60709 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.02□□□□□ -1.77
ACTBP60709 AL353726.1-201ENST00000614041 1000 ntBASIC4.02□□□□□ -1.77
ACTBP60709 AC004825.2-201ENST00000616634 455 ntBASIC4.02□□□□□ -1.77
ACTBP60709 AL645927.2-201ENST00000618350 349 ntBASIC4.02□□□□□ -1.77
ACTBP60709 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ACTBP60709 AL136964.1-201ENST00000622038 2990 ntBASIC4.02□□□□□ -1.77
ACTBP60709 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ACTBP60709 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ACTBP60709 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ACTBP60709 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ACTBP60709 Z98755.1-201ENST00000407015 1384 ntBASIC4.02□□□□□ -1.77
ACTBP60709 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
ACTBP60709 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.01□□□□□ -1.77
ACTBP60709 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
ACTBP60709 AC008725.1-201ENST00000605123 2263 ntBASIC4.01□□□□□ -1.77
ACTBP60709 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 ZFRP1-201ENST00000457579 2970 ntBASIC4.01□□□□□ -1.77
ACTBP60709 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ACTBP60709 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ACTBP60709 U8.4-201ENST00000363626 134 ntBASIC4.01□□□□□ -1.77
ACTBP60709 RNA5SP22-201ENST00000365393 109 ntBASIC4.01□□□□□ -1.77
ACTBP60709 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.01□□□□□ -1.77
ACTBP60709 GCNT6-201ENST00000379591 934 ntBASIC4.01□□□□□ -1.77
ACTBP60709 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ACTBP60709 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.01□□□□□ -1.77
ACTBP60709 UBTFL3-201ENST00000418934 1024 ntBASIC4.01□□□□□ -1.77
ACTBP60709 LINC00993-201ENST00000420453 540 ntBASIC4.01□□□□□ -1.77
ACTBP60709 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms