Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 NIFKP8-201ENST00000560500 874 ntBASIC5.6□□□□□ -1.51
NEK3P51956 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEK3P51956 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.6□□□□□ -1.51
NEK3P51956 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEK3P51956 SUMO2P15-201ENST00000604285 278 ntBASIC5.6□□□□□ -1.51
NEK3P51956 AP004247.3-201ENST00000608682 624 ntBASIC5.6□□□□□ -1.51
NEK3P51956 AC099676.1-201ENST00000608886 657 ntBASIC5.6□□□□□ -1.51
NEK3P51956 AL355816.2-201ENST00000610049 647 ntBASIC5.6□□□□□ -1.51
NEK3P51956 AC005840.5-201ENST00000619166 599 ntBASIC5.6□□□□□ -1.51
NEK3P51956 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.6□□□□□ -1.51
NEK3P51956 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.6□□□□□ -1.51
NEK3P51956 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEK3P51956 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.6□□□□□ -1.51
NEK3P51956 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NEK3P51956 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NEK3P51956 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
NEK3P51956 HSPA8P14-201ENST00000552265 1805 ntBASIC5.6□□□□□ -1.51
NEK3P51956 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.6□□□□□ -1.51
NEK3P51956 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEK3P51956 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NEK3P51956 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
NEK3P51956 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
NEK3P51956 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
NEK3P51956 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.59□□□□□ -1.51
NEK3P51956 AP000568.1-201ENST00000282964 442 ntBASIC5.59□□□□□ -1.51
NEK3P51956 RN7SKP6-201ENST00000364795 319 ntBASIC5.59□□□□□ -1.51
NEK3P51956 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 AL021331.1-201ENST00000402817 582 ntBASIC5.59□□□□□ -1.51
NEK3P51956 AL009179.1-201ENST00000406085 265 ntBASIC5.59□□□□□ -1.51
NEK3P51956 OR51A3P-201ENST00000413596 924 ntBASIC5.59□□□□□ -1.51
NEK3P51956 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.59□□□□□ -1.51
NEK3P51956 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.59□□□□□ -1.51
NEK3P51956 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 RIMKLBP2-201ENST00000424737 654 ntBASIC5.59□□□□□ -1.51
NEK3P51956 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.59□□□□□ -1.51
NEK3P51956 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.59□□□□□ -1.51
NEK3P51956 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.59□□□□□ -1.51
NEK3P51956 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 AL589765.3-201ENST00000446084 462 ntBASIC5.59□□□□□ -1.51
NEK3P51956 AL596266.1-201ENST00000448132 400 ntBASIC5.59□□□□□ -1.51
NEK3P51956 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.59□□□□□ -1.51
NEK3P51956 NAP1L1P3-201ENST00000462291 880 ntBASIC5.59□□□□□ -1.51
NEK3P51956 RN7SL188P-201ENST00000469842 285 ntBASIC5.59□□□□□ -1.51
NEK3P51956 AC010683.1-201ENST00000473673 378 ntBASIC5.59□□□□□ -1.51
NEK3P51956 OR2AO1P-201ENST00000476497 403 ntBASIC5.59□□□□□ -1.51
NEK3P51956 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.59□□□□□ -1.51
NEK3P51956 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.59□□□□□ -1.51
NEK3P51956 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.59□□□□□ -1.51
NEK3P51956 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.59□□□□□ -1.51
NEK3P51956 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NEK3P51956 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.59□□□□□ -1.51
NEK3P51956 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.59□□□□□ -1.51
NEK3P51956 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.59□□□□□ -1.51
NEK3P51956 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.59□□□□□ -1.51
NEK3P51956 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.59□□□□□ -1.51
NEK3P51956 AC009852.2-201ENST00000567898 485 ntBASIC5.59□□□□□ -1.51
NEK3P51956 MIR4716-201ENST00000579628 84 ntBASIC5.59□□□□□ -1.51
NEK3P51956 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.59□□□□□ -1.51
NEK3P51956 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.59□□□□□ -1.51
NEK3P51956 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.59□□□□□ -1.51
NEK3P51956 IMMP1LP3-201ENST00000604197 224 ntBASIC5.59□□□□□ -1.51
NEK3P51956 AL157392.4-201ENST00000609756 345 ntBASIC5.59□□□□□ -1.51
NEK3P51956 AC010975.3-201ENST00000618727 978 ntBASIC5.59□□□□□ -1.51
NEK3P51956 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 AL109659.3-201ENST00000624985 950 ntBASIC5.59□□□□□ -1.51
NEK3P51956 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.59□□□□□ -1.51
NEK3P51956 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.59□□□□□ -1.51
NEK3P51956 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NEK3P51956 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.59□□□□□ -1.51
NEK3P51956 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NEK3P51956 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEK3P51956 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.59□□□□□ -1.51
NEK3P51956 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
NEK3P51956 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.59□□□□□ -1.52
NEK3P51956 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NEK3P51956 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
NEK3P51956 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NEK3P51956 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.58□□□□□ -1.52
NEK3P51956 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 AC100757.1-201ENST00000616872 1835 ntBASIC5.58□□□□□ -1.52
NEK3P51956 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NEK3P51956 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
NEK3P51956 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.58□□□□□ -1.52
NEK3P51956 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEK3P51956 NANOGP5-201ENST00000424456 877 ntBASIC5.58□□□□□ -1.52
NEK3P51956 NANOGP4-201ENST00000427230 913 ntBASIC5.58□□□□□ -1.52
NEK3P51956 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.58□□□□□ -1.52
NEK3P51956 AL035246.1-201ENST00000433554 1255 ntBASIC5.58□□□□□ -1.52
NEK3P51956 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.58□□□□□ -1.52
NEK3P51956 PRDX3P4-201ENST00000470828 747 ntBASIC5.58□□□□□ -1.52
NEK3P51956 GAPDHP39-201ENST00000481866 979 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms