Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.17□□□□□ -1.74
HCFC1P51610 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HCFC1P51610 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HCFC1P51610 ICE2P1-201ENST00000512800 1849 ntBASIC4.17□□□□□ -1.74
HCFC1P51610 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.17□□□□□ -1.74
HCFC1P51610 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 AC027290.2-201ENST00000623210 18662 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 AC087190.4-201ENST00000574616 8334 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 LRRC37BP1-201ENST00000398851 714 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 RPL17P36-201ENST00000420302 549 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 MORF4L1P7-201ENST00000426038 703 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.16□□□□□ -1.74
HCFC1P51610 AL513321.1-201ENST00000441175 761 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC016772.1-201ENST00000444170 1261 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC239367.2-201ENST00000447309 705 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AL359073.1-201ENST00000448036 403 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
HCFC1P51610 AC091180.1-201ENST00000462104 372 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC007537.2-201ENST00000472093 511 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC022336.1-201ENST00000475510 337 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC090543.1-201ENST00000492168 485 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC104629.1-201ENST00000494226 508 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.16□□□□□ -1.74
HCFC1P51610 AC007016.1-201ENST00000512110 244 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.16□□□□□ -1.74
HCFC1P51610 AC069061.3-201ENST00000582254 823 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 MIR4715-201ENST00000584117 79 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 RNF138P2-201ENST00000603490 592 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.16□□□□□ -1.74
HCFC1P51610 AL121890.3-201ENST00000618494 516 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.16□□□□□ -1.74
HCFC1P51610 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.16□□□□□ -1.74
HCFC1P51610 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.16□□□□□ -1.74
HCFC1P51610 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.16□□□□□ -1.74
HCFC1P51610 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 SOCS5P3-201ENST00000425115 1576 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.16□□□□□ -1.74
HCFC1P51610 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HCFC1P51610 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HCFC1P51610 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 RNU6-618P-201ENST00000363518 112 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 RNU6-650P-201ENST00000365658 111 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HCFC1P51610 RPL7P57-201ENST00000423238 740 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.16□□□□□ -1.74
HCFC1P51610 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HCFC1P51610 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.16□□□□□ -1.74
HCFC1P51610 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.16□□□□□ -1.74
HCFC1P51610 AC093801.2-201ENST00000503966 1050 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.16□□□□□ -1.74
HCFC1P51610 RNU6-889P-201ENST00000517189 103 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.16□□□□□ -1.74
HCFC1P51610 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.16□□□□□ -1.74
HCFC1P51610 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.16□□□□□ -1.74
HCFC1P51610 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.16□□□□□ -1.74
HCFC1P51610 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.16□□□□□ -1.74
HCFC1P51610 AC079148.1-201ENST00000565944 819 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.16□□□□□ -1.74
HCFC1P51610 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.16□□□□□ -1.74
HCFC1P51610 AC069366.1-201ENST00000583159 838 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AL020997.2-201ENST00000602607 184 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC135178.6-201ENST00000605314 398 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 AC011815.3-201ENST00000624194 473 ntBASIC4.16□□□□□ -1.74
HCFC1P51610 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.16□□□□□ -1.74
HCFC1P51610 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.15□□□□□ -1.74
HCFC1P51610 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.15□□□□□ -1.74
HCFC1P51610 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HCFC1P51610 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HCFC1P51610 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HCFC1P51610 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HCFC1P51610 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HCFC1P51610 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.15□□□□□ -1.74
HCFC1P51610 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HCFC1P51610 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HCFC1P51610 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HCFC1P51610 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.15□□□□□ -1.75
HCFC1P51610 AL121878.1-201ENST00000418638 859 ntBASIC4.15□□□□□ -1.75
HCFC1P51610 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.15□□□□□ -1.75
HCFC1P51610 RAB9AP5-201ENST00000437794 597 ntBASIC4.15□□□□□ -1.75
HCFC1P51610 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.15□□□□□ -1.75
HCFC1P51610 RAB9AP2-201ENST00000443911 597 ntBASIC4.15□□□□□ -1.75
HCFC1P51610 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.15□□□□□ -1.75
HCFC1P51610 RAB28P3-201ENST00000448325 597 ntBASIC4.15□□□□□ -1.75
HCFC1P51610 AC010326.1-201ENST00000462726 602 ntBASIC4.15□□□□□ -1.75
HCFC1P51610 CABYRP1-201ENST00000465493 1045 ntBASIC4.15□□□□□ -1.75
HCFC1P51610 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.15□□□□□ -1.75
HCFC1P51610 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms