Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MIR5096-201ENST00000583713 70 ntBASIC4.54□□□□□ -1.68
RORAP35398 SNORD91B-202ENST00000608459 222 ntBASIC4.54□□□□□ -1.68
RORAP35398 AC019193.2-201ENST00000610012 634 ntBASIC4.54□□□□□ -1.68
RORAP35398 MIR378J-201ENST00000611988 109 ntBASIC4.54□□□□□ -1.68
RORAP35398 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RORAP35398 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
RORAP35398 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RORAP35398 MAPK10-304ENST00000641341 3984 ntBASIC4.54□□□□□ -1.68
RORAP35398 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RORAP35398 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RORAP35398 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RORAP35398 DHX40P1-201ENST00000588725 1412 ntBASIC4.54□□□□□ -1.68
RORAP35398 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RORAP35398 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RORAP35398 Z98755.1-201ENST00000407015 1384 ntBASIC4.53□□□□□ -1.68
RORAP35398 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.53□□□□□ -1.68
RORAP35398 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.53□□□□□ -1.68
RORAP35398 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.53□□□□□ -1.68
RORAP35398 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RORAP35398 TLK1P1-201ENST00000456760 2440 ntBASIC4.53□□□□□ -1.68
RORAP35398 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 AC011155.1-201ENST00000316512 456 ntBASIC4.53□□□□□ -1.68
RORAP35398 AC136624.1-201ENST00000400791 413 ntBASIC4.53□□□□□ -1.68
RORAP35398 AL049697.2-201ENST00000403708 294 ntBASIC4.53□□□□□ -1.68
RORAP35398 RN7SKP106-201ENST00000410832 272 ntBASIC4.53□□□□□ -1.68
RORAP35398 AL158073.1-201ENST00000426848 1104 ntBASIC4.53□□□□□ -1.68
RORAP35398 RPS17P8-201ENST00000434525 335 ntBASIC4.53□□□□□ -1.68
RORAP35398 AC112206.1-201ENST00000468416 477 ntBASIC4.53□□□□□ -1.68
RORAP35398 SEPT7P6-201ENST00000469999 1143 ntBASIC4.53□□□□□ -1.68
RORAP35398 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 AC111000.3-201ENST00000508057 576 ntBASIC4.53□□□□□ -1.68
RORAP35398 CCNHP1-201ENST00000513311 678 ntBASIC4.53□□□□□ -1.68
RORAP35398 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.53□□□□□ -1.68
RORAP35398 RNU2-30P-201ENST00000516209 141 ntBASIC4.53□□□□□ -1.68
RORAP35398 RNU1-6P-201ENST00000516290 144 ntBASIC4.53□□□□□ -1.68
RORAP35398 C1GALT1P3-201ENST00000522049 819 ntBASIC4.53□□□□□ -1.68
RORAP35398 AC025857.1-201ENST00000525252 377 ntBASIC4.53□□□□□ -1.68
RORAP35398 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.53□□□□□ -1.68
RORAP35398 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.53□□□□□ -1.68
RORAP35398 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
RORAP35398 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.53□□□□□ -1.68
RORAP35398 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.53□□□□□ -1.68
RORAP35398 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.53□□□□□ -1.68
RORAP35398 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.53□□□□□ -1.68
RORAP35398 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.53□□□□□ -1.68
RORAP35398 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.53□□□□□ -1.68
RORAP35398 AC012414.7-202ENST00000622705 1090 ntBASIC4.53□□□□□ -1.68
RORAP35398 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.53□□□□□ -1.68
RORAP35398 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.53□□□□□ -1.68
RORAP35398 AC006453.5-201ENST00000636451 619 ntBASIC4.53□□□□□ -1.68
RORAP35398 AC073869.10-201ENST00000642016 354 ntBASIC4.53□□□□□ -1.68
RORAP35398 AL132640.2-201ENST00000559968 1698 ntBASIC4.53□□□□□ -1.68
RORAP35398 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RORAP35398 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.53□□□□□ -1.68
RORAP35398 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RORAP35398 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RORAP35398 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.52□□□□□ -1.69
RORAP35398 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RORAP35398 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.52□□□□□ -1.69
RORAP35398 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RORAP35398 AL442639.1-201ENST00000625030 1899 ntBASIC4.52□□□□□ -1.69
RORAP35398 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
RORAP35398 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
RORAP35398 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 OR4K15-201ENST00000305051 1216 ntBASIC4.52□□□□□ -1.69
RORAP35398 OR52B1P-201ENST00000316506 909 ntBASIC4.52□□□□□ -1.69
RORAP35398 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RORAP35398 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 RPL6P29-201ENST00000414863 865 ntBASIC4.52□□□□□ -1.69
RORAP35398 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.52□□□□□ -1.69
RORAP35398 AC099336.2-201ENST00000422457 254 ntBASIC4.52□□□□□ -1.69
RORAP35398 OR5M12P-201ENST00000423388 929 ntBASIC4.52□□□□□ -1.69
RORAP35398 AL355994.1-201ENST00000424379 260 ntBASIC4.52□□□□□ -1.69
RORAP35398 DNAJC19P7-201ENST00000428811 344 ntBASIC4.52□□□□□ -1.69
RORAP35398 AL451139.1-201ENST00000434718 346 ntBASIC4.52□□□□□ -1.69
RORAP35398 RPL12P46-201ENST00000436610 195 ntBASIC4.52□□□□□ -1.69
RORAP35398 OR6C72P-201ENST00000451403 892 ntBASIC4.52□□□□□ -1.69
RORAP35398 CEACAMP6-201ENST00000452007 574 ntBASIC4.52□□□□□ -1.69
RORAP35398 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.52□□□□□ -1.69
RORAP35398 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.52□□□□□ -1.69
RORAP35398 AC099560.2-201ENST00000457554 255 ntBASIC4.52□□□□□ -1.69
RORAP35398 SEPT14P1-201ENST00000458703 648 ntBASIC4.52□□□□□ -1.69
RORAP35398 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RORAP35398 RN7SL481P-201ENST00000477764 299 ntBASIC4.52□□□□□ -1.69
RORAP35398 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.52□□□□□ -1.69
RORAP35398 AC093720.1-201ENST00000505681 714 ntBASIC4.52□□□□□ -1.69
RORAP35398 AC091868.1-201ENST00000508746 304 ntBASIC4.52□□□□□ -1.69
RORAP35398 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms