Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 MIR1269B-201ENST00000580405 75 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC009994.1-201ENST00000606889 253 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 U4.5-201ENST00000617137 123 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC006840.1-201ENST00000623069 542 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC063952.1-203ENST00000634410 658 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 AL121950.1-201ENST00000624993 2077 ntBASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CSB-PGBD3P0DP91 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC013488.1-201ENST00000526618 1838 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 MRPL53P1-201ENST00000414323 319 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 ISCA1P1-201ENST00000426679 387 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AP001324.1-201ENST00000428553 399 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 HMGB3P10-201ENST00000434734 572 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 MTND1P30-201ENST00000441241 901 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC037198.2-201ENST00000478845 733 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 GAPDHP39-201ENST00000481866 979 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 OR5M14P-201ENST00000506803 618 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 RN7SKP244-201ENST00000516513 307 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC106038.2-201ENST00000520706 568 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 IGJP1-201ENST00000522682 475 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 IGHV1-14-201ENST00000523391 241 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC090525.3-201ENST00000605601 189 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC097505.1-201ENST00000610199 565 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 RN7SL544P-201ENST00000617232 284 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC241377.1-201ENST00000619797 406 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 RN7SL763P-201ENST00000620922 284 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC018445.2-201ENST00000622987 260 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AC107021.2-201ENST00000567714 2095 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 AL355852.1-201ENST00000454081 1771 ntBASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CSB-PGBD3P0DP91 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CSB-PGBD3P0DP91 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CSB-PGBD3P0DP91 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
CSB-PGBD3P0DP91 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CSB-PGBD3P0DP91 AP002370.1-201ENST00000528055 1602 ntBASIC7.96□□□□□ -1.13
CSB-PGBD3P0DP91 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.96□□□□□ -1.13
CSB-PGBD3P0DP91 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms