Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FREM3P0C091 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FREM3P0C091 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FREM3P0C091 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FREM3P0C091 AC092435.4-201ENST00000623012 4159 ntBASIC3.99□□□□□ -1.77
FREM3P0C091 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FREM3P0C091 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.99□□□□□ -1.77
FREM3P0C091 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.99□□□□□ -1.77
FREM3P0C091 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.99□□□□□ -1.77
FREM3P0C091 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 AC087190.4-201ENST00000574616 8334 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 MIR331-201ENST00000362302 94 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 RNA5SP515-201ENST00000364570 118 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 RN7SKP235-201ENST00000410662 305 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 ARAFP1-201ENST00000422172 605 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.98□□□□□ -1.77
FREM3P0C091 RPS4XP12-201ENST00000461747 709 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.98□□□□□ -1.77
FREM3P0C091 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.98□□□□□ -1.77
FREM3P0C091 AC006338.2-201ENST00000616864 791 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FREM3P0C091 AC140479.6-201ENST00000633535 357 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 HSPD1P14-201ENST00000432666 1618 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.98□□□□□ -1.77
FREM3P0C091 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 RNA5SP366-201ENST00000365454 123 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.98□□□□□ -1.77
FREM3P0C091 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 RPS16P5-201ENST00000406501 404 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.98□□□□□ -1.77
FREM3P0C091 PHBP16-201ENST00000446318 950 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.98□□□□□ -1.77
FREM3P0C091 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC3.98□□□□□ -1.77
FREM3P0C091 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.98□□□□□ -1.77
FREM3P0C091 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.98□□□□□ -1.77
FREM3P0C091 SNORA31.9-201ENST00000516429 84 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.98□□□□□ -1.77
FREM3P0C091 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.98□□□□□ -1.77
FREM3P0C091 MIR4715-201ENST00000584117 79 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.98□□□□□ -1.77
FREM3P0C091 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.98□□□□□ -1.77
FREM3P0C091 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.98□□□□□ -1.77
FREM3P0C091 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 MIR6891-201ENST00000618788 93 ntBASIC3.98□□□□□ -1.77
FREM3P0C091 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FREM3P0C091 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.98□□□□□ -1.77
FREM3P0C091 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
FREM3P0C091 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
FREM3P0C091 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.98□□□□□ -1.77
FREM3P0C091 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.98□□□□□ -1.77
FREM3P0C091 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.98□□□□□ -1.77
FREM3P0C091 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FREM3P0C091 AC091046.3-201ENST00000631455 1574 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
FREM3P0C091 SNORA57.1-201ENST00000391227 145 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 UBTFL3-201ENST00000418934 1024 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.97□□□□□ -1.77
FREM3P0C091 COX6CP15-201ENST00000426313 211 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.97□□□□□ -1.77
FREM3P0C091 ABCF2P2-201ENST00000450549 296 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.97□□□□□ -1.77
FREM3P0C091 UBTFL6-201ENST00000477929 1024 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 AC041039.1-201ENST00000485656 536 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.97□□□□□ -1.77
FREM3P0C091 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC3.97□□□□□ -1.77
FREM3P0C091 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.97□□□□□ -1.77
FREM3P0C091 AC093765.1-201ENST00000603758 881 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 AC010201.1-201ENST00000605051 540 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.97□□□□□ -1.77
FREM3P0C091 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FREM3P0C091 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FREM3P0C091 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
FREM3P0C091 AP001273.1-201ENST00000624493 3152 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC3.97□□□□□ -1.77
FREM3P0C091 RNU1-44P-201ENST00000384453 163 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 RAD23BP1-201ENST00000421404 1227 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.97□□□□□ -1.77
FREM3P0C091 RPS27AP12-201ENST00000429552 465 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.97□□□□□ -1.77
FREM3P0C091 AC090013.1-201ENST00000485147 480 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 RPS27AP16-201ENST00000492222 470 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.97□□□□□ -1.77
FREM3P0C091 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.97□□□□□ -1.77
FREM3P0C091 RPL7P50-201ENST00000600588 727 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 AL035461.2-201ENST00000619201 524 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 MIR6830-201ENST00000636015 70 ntBASIC3.97□□□□□ -1.77
FREM3P0C091 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
FREM3P0C091 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FREM3P0C091 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms