Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
APOEP02649 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
APOEP02649 KARSP3-201ENST00000571212 1504 ntBASIC4.77□□□□□ -1.65
APOEP02649 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
APOEP02649 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
APOEP02649 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.76□□□□□ -1.65
APOEP02649 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
APOEP02649 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
APOEP02649 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
APOEP02649 AC021146.4-201ENST00000309229 279 ntBASIC4.76□□□□□ -1.65
APOEP02649 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
APOEP02649 RNA5SP332-201ENST00000391063 115 ntBASIC4.76□□□□□ -1.65
APOEP02649 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
APOEP02649 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.76□□□□□ -1.65
APOEP02649 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.76□□□□□ -1.65
APOEP02649 GAPDHP49-201ENST00000421421 961 ntBASIC4.76□□□□□ -1.65
APOEP02649 ARL4AP3-201ENST00000441452 574 ntBASIC4.76□□□□□ -1.65
APOEP02649 CEACAMP9-201ENST00000442990 513 ntBASIC4.76□□□□□ -1.65
APOEP02649 PTMAP3-201ENST00000447474 330 ntBASIC4.76□□□□□ -1.65
APOEP02649 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
APOEP02649 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.76□□□□□ -1.65
APOEP02649 FGF7P3-201ENST00000454645 303 ntBASIC4.76□□□□□ -1.65
APOEP02649 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
APOEP02649 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.76□□□□□ -1.65
APOEP02649 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.76□□□□□ -1.65
APOEP02649 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.76□□□□□ -1.65
APOEP02649 PDCD5P1-201ENST00000543528 309 ntBASIC4.76□□□□□ -1.65
APOEP02649 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.76□□□□□ -1.65
APOEP02649 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.76□□□□□ -1.65
APOEP02649 AC093535.2-201ENST00000624769 2326 ntBASIC4.76□□□□□ -1.65
APOEP02649 AL049536.1-201ENST00000625043 744 ntBASIC4.76□□□□□ -1.65
APOEP02649 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.76□□□□□ -1.65
APOEP02649 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.76□□□□□ -1.65
APOEP02649 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
APOEP02649 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
APOEP02649 MTND4P26-201ENST00000415971 1359 ntBASIC4.76□□□□□ -1.65
APOEP02649 EOGT-210ENST00000615922 1931 ntBASIC4.76□□□□□ -1.65
APOEP02649 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.76□□□□□ -1.65
APOEP02649 AL592148.3-201ENST00000608771 2646 ntBASIC4.76□□□□□ -1.65
APOEP02649 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOEP02649 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOEP02649 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOEP02649 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
APOEP02649 AC092111.2-201ENST00000611627 1414 ntBASIC4.75□□□□□ -1.65
APOEP02649 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOEP02649 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
APOEP02649 AC010132.2-201ENST00000295493 1043 ntBASIC4.75□□□□□ -1.65
APOEP02649 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOEP02649 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
APOEP02649 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
APOEP02649 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
APOEP02649 GLULP6-201ENST00000399502 913 ntBASIC4.75□□□□□ -1.65
APOEP02649 LAP3P1-201ENST00000403648 294 ntBASIC4.75□□□□□ -1.65
APOEP02649 VDAC1P9-201ENST00000412766 841 ntBASIC4.75□□□□□ -1.65
APOEP02649 CEACAMP8-201ENST00000413902 580 ntBASIC4.75□□□□□ -1.65
APOEP02649 RPS12P10-201ENST00000427031 377 ntBASIC4.75□□□□□ -1.65
APOEP02649 YWHAZP2-201ENST00000440317 728 ntBASIC4.75□□□□□ -1.65
APOEP02649 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.75□□□□□ -1.65
APOEP02649 TXNP2-201ENST00000443918 295 ntBASIC4.75□□□□□ -1.65
APOEP02649 RPL5P30-201ENST00000465511 891 ntBASIC4.75□□□□□ -1.65
APOEP02649 OR52A4P-201ENST00000472867 958 ntBASIC4.75□□□□□ -1.65
APOEP02649 PPM1AP1-201ENST00000502740 1135 ntBASIC4.75□□□□□ -1.65
APOEP02649 AK3P4-201ENST00000504283 583 ntBASIC4.75□□□□□ -1.65
APOEP02649 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.75□□□□□ -1.65
APOEP02649 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.75□□□□□ -1.65
APOEP02649 RFPL4AP3-201ENST00000515267 345 ntBASIC4.75□□□□□ -1.65
APOEP02649 NPM1P6-201ENST00000521088 871 ntBASIC4.75□□□□□ -1.65
APOEP02649 CYCSP28-201ENST00000534284 321 ntBASIC4.75□□□□□ -1.65
APOEP02649 GSTP1P1-201ENST00000548078 319 ntBASIC4.75□□□□□ -1.65
APOEP02649 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.75□□□□□ -1.65
APOEP02649 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.75□□□□□ -1.65
APOEP02649 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.75□□□□□ -1.65
APOEP02649 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.75□□□□□ -1.65
APOEP02649 AC020915.5-201ENST00000596836 964 ntBASIC4.75□□□□□ -1.65
APOEP02649 AC093765.1-201ENST00000603758 881 ntBASIC4.75□□□□□ -1.65
APOEP02649 uc_338.18-201ENST00000615451 175 ntBASIC4.75□□□□□ -1.65
APOEP02649 AP005019.3-201ENST00000620418 560 ntBASIC4.75□□□□□ -1.65
APOEP02649 AL023881.1-201ENST00000621088 301 ntBASIC4.75□□□□□ -1.65
APOEP02649 AP003499.2-201ENST00000624100 483 ntBASIC4.75□□□□□ -1.65
APOEP02649 AC067931.1-201ENST00000624190 671 ntBASIC4.75□□□□□ -1.65
APOEP02649 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.75□□□□□ -1.65
APOEP02649 AP001002.1-201ENST00000625148 1513 ntBASIC4.75□□□□□ -1.65
APOEP02649 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.75□□□□□ -1.65
APOEP02649 HSPD1P14-201ENST00000432666 1618 ntBASIC4.75□□□□□ -1.65
APOEP02649 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.75□□□□□ -1.65
APOEP02649 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOEP02649 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.75□□□□□ -1.65
APOEP02649 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.75□□□□□ -1.65
APOEP02649 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOEP02649 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOEP02649 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOEP02649 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOEP02649 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
APOEP02649 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOEP02649 MIR708-201ENST00000390708 88 ntBASIC4.74□□□□□ -1.65
APOEP02649 AL512430.2-201ENST00000406786 339 ntBASIC4.74□□□□□ -1.65
APOEP02649 AL356968.2-201ENST00000412769 1257 ntBASIC4.74□□□□□ -1.65
APOEP02649 SEPT7P8-201ENST00000413308 775 ntBASIC4.74□□□□□ -1.65
APOEP02649 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.74□□□□□ -1.65
APOEP02649 RPA2P2-201ENST00000419698 796 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms