Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.46□□□□□ -1.7
CLDN9O95484 SDAD1P1-202ENST00000524156 2051 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLDN9O95484 Z95327.2-201ENST00000414579 1873 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN9O95484 AC131971.1-201ENST00000332881 1482 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN9O95484 AL645733.1-201ENST00000402250 217 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 AC006065.1-201ENST00000422539 802 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 MTCO1P45-201ENST00000431457 267 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 AC005154.2-201ENST00000438110 379 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 ARL4AP3-201ENST00000441452 574 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN9O95484 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN9O95484 MORF4L1P4-201ENST00000450245 976 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 AL935212.3-201ENST00000450729 284 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 RPL10P17-201ENST00000453852 316 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 ISCUP1-201ENST00000454451 448 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN9O95484 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN9O95484 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN9O95484 RN7SL329P-201ENST00000467740 299 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 AC104763.1-201ENST00000475274 360 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 RPL36AP41-201ENST00000493820 306 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN9O95484 RNA5SP446-201ENST00000515955 82 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN9O95484 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN9O95484 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN9O95484 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN9O95484 AC027455.1-201ENST00000574104 594 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLDN9O95484 AL137072.1-201ENST00000603444 466 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 AC005084.1-201ENST00000605160 304 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CLDN9O95484 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.46□□□□□ -1.7
CLDN9O95484 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN9O95484 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN9O95484 AC132825.1-201ENST00000463573 2247 ntBASIC4.46□□□□□ -1.7
CLDN9O95484 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CLDN9O95484 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLDN9O95484 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN9O95484 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN9O95484 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.46□□□□□ -1.7
CLDN9O95484 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CLDN9O95484 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLDN9O95484 RN7SKP103-201ENST00000363848 320 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AL109941.1-201ENST00000401925 229 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AL034374.1-201ENST00000406329 351 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
CLDN9O95484 RN7SKP199-201ENST00000410325 305 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN9O95484 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.45□□□□□ -1.7
CLDN9O95484 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN9O95484 RPL21P91-201ENST00000429231 479 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 MAPRE1P3-201ENST00000435438 796 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN9O95484 ELOCP3-201ENST00000439303 348 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN9O95484 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN9O95484 CALM1P2-201ENST00000452941 448 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC091685.2-201ENST00000454924 864 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 ATP5G1P3-201ENST00000463301 410 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC104629.2-201ENST00000468627 598 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN9O95484 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.45□□□□□ -1.7
CLDN9O95484 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN9O95484 IGHV3-63-201ENST00000518422 341 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.45□□□□□ -1.7
CLDN9O95484 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.45□□□□□ -1.7
CLDN9O95484 GSTP1P1-201ENST00000548078 319 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 PCNPP1-201ENST00000552501 511 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC105129.1-201ENST00000560250 297 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN9O95484 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN9O95484 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN9O95484 AC020915.5-201ENST00000596836 964 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 BMS1P7-201ENST00000602440 1052 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC084373.1-201ENST00000603311 235 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC034236.3-201ENST00000605999 461 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN9O95484 MIR6748-201ENST00000610433 71 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.45□□□□□ -1.7
CLDN9O95484 MIR6853-201ENST00000619642 74 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 AC092159.4-201ENST00000624944 550 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 U3.53-201ENST00000628922 216 ntBASIC4.45□□□□□ -1.7
CLDN9O95484 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CLDN9O95484 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN9O95484 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN9O95484 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLDN9O95484 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CLDN9O95484 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.45□□□□□ -1.7
CLDN9O95484 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
CLDN9O95484 AC108467.2-201ENST00000617640 1597 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 AC103591.2-201ENST00000265259 766 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 RNU1-20P-201ENST00000363314 162 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 RNU6-670P-201ENST00000364312 104 ntBASIC4.44□□□□□ -1.7
CLDN9O95484 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN9O95484 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms