Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.08□□□□□ -1.6
UBE4BO95155 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBE4BO95155 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
UBE4BO95155 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBE4BO95155 UGT2B26P-201ENST00000508672 1613 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
UBE4BO95155 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
UBE4BO95155 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
UBE4BO95155 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBE4BO95155 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.07□□□□□ -1.6
UBE4BO95155 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.07□□□□□ -1.6
UBE4BO95155 RFESDP1-201ENST00000422350 461 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 MTCO1P45-201ENST00000431457 267 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 AL049745.1-201ENST00000433953 286 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 XKRYP6-201ENST00000440468 1116 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 XKRYP3-201ENST00000442113 1116 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 RPL36AP15-201ENST00000444514 266 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.07□□□□□ -1.6
UBE4BO95155 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UBE4BO95155 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.07□□□□□ -1.6
UBE4BO95155 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.07□□□□□ -1.6
UBE4BO95155 RPS29P22-201ENST00000472363 168 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 RPL7AP10-201ENST00000481016 791 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
UBE4BO95155 MTND3P6-201ENST00000485242 339 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 AC105233.1-201ENST00000498840 781 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.07□□□□□ -1.6
UBE4BO95155 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.07□□□□□ -1.6
UBE4BO95155 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.07□□□□□ -1.6
UBE4BO95155 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.07□□□□□ -1.6
UBE4BO95155 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.07□□□□□ -1.6
UBE4BO95155 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.07□□□□□ -1.6
UBE4BO95155 AC091178.1-203ENST00000584586 279 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.07□□□□□ -1.6
UBE4BO95155 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.07□□□□□ -1.6
UBE4BO95155 AC073091.2-201ENST00000603205 907 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 MIR378J-201ENST00000611988 109 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 AC140113.4-201ENST00000622087 222 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 AP000346.3-201ENST00000622821 210 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 AC010435.1-201ENST00000623353 1177 ntBASIC5.07□□□□□ -1.6
UBE4BO95155 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.07□□□□□ -1.6
UBE4BO95155 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.07□□□□□ -1.6
UBE4BO95155 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBE4BO95155 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UBE4BO95155 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.07□□□□□ -1.6
UBE4BO95155 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
UBE4BO95155 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBE4BO95155 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBE4BO95155 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBE4BO95155 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBE4BO95155 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBE4BO95155 RNA5SP397-201ENST00000391323 118 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBE4BO95155 AC012519.1-201ENST00000424588 610 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.06□□□□□ -1.6
UBE4BO95155 RPL21P91-201ENST00000429231 479 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.06□□□□□ -1.6
UBE4BO95155 ARL5AP3-201ENST00000439327 386 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 TPT1P13-201ENST00000449760 499 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 RPL23AP65-201ENST00000475608 468 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 LARP7P4-201ENST00000481075 878 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
UBE4BO95155 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.06□□□□□ -1.6
UBE4BO95155 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.06□□□□□ -1.6
UBE4BO95155 AC022784.5-201ENST00000522241 437 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 OR4V1P-201ENST00000525394 1140 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 OR5M2P-201ENST00000529003 936 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 AL390334.1-201ENST00000556395 450 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.06□□□□□ -1.6
UBE4BO95155 MIR4330-201ENST00000579077 105 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.06□□□□□ -1.6
UBE4BO95155 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UBE4BO95155 AC068790.7-201ENST00000602347 528 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 AL133338.2-201ENST00000604292 736 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBE4BO95155 AL391684.1-202ENST00000641293 1636 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UBE4BO95155 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
UBE4BO95155 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
UBE4BO95155 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
UBE4BO95155 AC108751.5-201ENST00000492880 1336 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.06□□□□□ -1.6
UBE4BO95155 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.06□□□□□ -1.6
UBE4BO95155 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
UBE4BO95155 AC027228.2-201ENST00000567141 2154 ntBASIC5.05□□□□□ -1.6
UBE4BO95155 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UBE4BO95155 AP001002.1-201ENST00000625148 1513 ntBASIC5.05□□□□□ -1.6
UBE4BO95155 RNU6-670P-201ENST00000364312 104 ntBASIC5.05□□□□□ -1.6
UBE4BO95155 ST13P16-201ENST00000401760 781 ntBASIC5.05□□□□□ -1.6
UBE4BO95155 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
UBE4BO95155 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UBE4BO95155 RNA5SP296-201ENST00000410523 111 ntBASIC5.05□□□□□ -1.6
UBE4BO95155 RPL26P29-201ENST00000415623 438 ntBASIC5.05□□□□□ -1.6
UBE4BO95155 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.05□□□□□ -1.6
UBE4BO95155 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.05□□□□□ -1.6
UBE4BO95155 USP9YP9-201ENST00000429406 715 ntBASIC5.05□□□□□ -1.6
UBE4BO95155 AC022022.1-201ENST00000430304 178 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms