Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC007497.1-201ENST00000610421 561 ntBASIC3.86□□□□□ -1.79
UPK1BO75841 AL645927.2-201ENST00000618350 349 ntBASIC3.86□□□□□ -1.79
UPK1BO75841 BMS1P21-201ENST00000634565 365 ntBASIC3.86□□□□□ -1.79
UPK1BO75841 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1BO75841 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
UPK1BO75841 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1BO75841 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK1BO75841 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
UPK1BO75841 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
UPK1BO75841 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1BO75841 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
UPK1BO75841 AC010300.1-201ENST00000600671 5134 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 AC011155.1-201ENST00000316512 456 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
UPK1BO75841 RNU6-386P-201ENST00000362650 107 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 RN7SKP257-201ENST00000364525 309 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1BO75841 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1BO75841 RNU6-178P-201ENST00000384631 104 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.85□□□□□ -1.79
UPK1BO75841 RPS26P47-201ENST00000427219 348 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 AC011742.1-201ENST00000431448 434 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 RPS26P40-201ENST00000435209 294 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 SUMO2P3-201ENST00000438311 288 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 AL137845.2-201ENST00000444292 988 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 FCF1P7-201ENST00000451185 558 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 CALM1P2-201ENST00000452941 448 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1BO75841 RPL35AP19-201ENST00000469425 329 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 STRADBP1-201ENST00000478954 1281 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.85□□□□□ -1.79
UPK1BO75841 AC091868.1-201ENST00000508746 304 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.85□□□□□ -1.79
UPK1BO75841 RNA5SP96-201ENST00000516041 107 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 RNA5SP271-201ENST00000516700 88 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1BO75841 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1BO75841 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1BO75841 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.85□□□□□ -1.79
UPK1BO75841 AC084033.1-201ENST00000550830 633 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1BO75841 AL845552.1-201ENST00000556820 323 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 AC027281.1-201ENST00000574178 758 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 MIR4505-201ENST00000582238 73 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1BO75841 AC067773.1-201ENST00000603284 1094 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 AP003392.5-201ENST00000607857 415 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 AL133370.2-201ENST00000619934 439 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 FO681491.1-202ENST00000623392 737 ntBASIC3.85□□□□□ -1.79
UPK1BO75841 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.85□□□□□ -1.79
UPK1BO75841 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1BO75841 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1BO75841 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
UPK1BO75841 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
UPK1BO75841 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1BO75841 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1BO75841 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
UPK1BO75841 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1BO75841 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1BO75841 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1BO75841 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1BO75841 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
UPK1BO75841 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
UPK1BO75841 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
UPK1BO75841 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1BO75841 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1BO75841 AL607077.1-201ENST00000401718 499 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 Z97832.1-201ENST00000402490 328 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1BO75841 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC114755.2-201ENST00000413520 361 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.84□□□□□ -1.79
UPK1BO75841 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC099336.2-201ENST00000422457 254 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 RBMY1KP-201ENST00000423480 476 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 ATP5A1P8-201ENST00000423669 1291 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AC115285.1-201ENST00000424879 736 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1BO75841 CYCSP12-201ENST00000437729 300 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 RPL12P49-201ENST00000441100 121 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1BO75841 RPS26P41-201ENST00000450370 284 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AL162388.1-201ENST00000450912 352 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AL356390.1-201ENST00000455684 397 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AC099560.2-201ENST00000457554 255 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AC097484.1-201ENST00000471148 389 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms