Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.31□□□□□ -1.72
CTNSO60931 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTNSO60931 AC137768.1-201ENST00000549998 553 ntBASIC4.31□□□□□ -1.72
CTNSO60931 AC104785.1-201ENST00000603220 588 ntBASIC4.31□□□□□ -1.72
CTNSO60931 AC015908.5-201ENST00000623289 343 ntBASIC4.31□□□□□ -1.72
CTNSO60931 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTNSO60931 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTNSO60931 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTNSO60931 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTNSO60931 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.31□□□□□ -1.72
CTNSO60931 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTNSO60931 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.31□□□□□ -1.72
CTNSO60931 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTNSO60931 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTNSO60931 AC139713.2-215ENST00000641428 5037 ntBASIC4.31□□□□□ -1.72
CTNSO60931 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTNSO60931 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNSO60931 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNSO60931 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CTNSO60931 MIR921-201ENST00000401133 56 ntBASIC4.3□□□□□ -1.72
CTNSO60931 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNSO60931 AC119751.6-201ENST00000416712 186 ntBASIC4.3□□□□□ -1.72
CTNSO60931 AC096644.3-201ENST00000416788 338 ntBASIC4.3□□□□□ -1.72
CTNSO60931 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNSO60931 GAPDHP49-201ENST00000421421 961 ntBASIC4.3□□□□□ -1.72
CTNSO60931 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNSO60931 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTNSO60931 RN7SL354P-201ENST00000469282 294 ntBASIC4.3□□□□□ -1.72
CTNSO60931 RPL23AP72-201ENST00000492447 435 ntBASIC4.3□□□□□ -1.72
CTNSO60931 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.3□□□□□ -1.72
CTNSO60931 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.3□□□□□ -1.72
CTNSO60931 TCP11X3P-202ENST00000514289 1254 ntBASIC4.3□□□□□ -1.72
CTNSO60931 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNSO60931 MTCYBP19-201ENST00000517463 1124 ntBASIC4.3□□□□□ -1.72
CTNSO60931 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNSO60931 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTNSO60931 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTNSO60931 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNSO60931 AC011270.1-201ENST00000558606 583 ntBASIC4.3□□□□□ -1.72
CTNSO60931 SULT1C2P2-201ENST00000562517 294 ntBASIC4.3□□□□□ -1.72
CTNSO60931 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNSO60931 AC209154.1-201ENST00000582156 337 ntBASIC4.3□□□□□ -1.72
CTNSO60931 AC069061.3-201ENST00000582254 823 ntBASIC4.3□□□□□ -1.72
CTNSO60931 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNSO60931 HMGB2P1-201ENST00000591146 634 ntBASIC4.3□□□□□ -1.72
CTNSO60931 AL158196.1-201ENST00000616786 434 ntBASIC4.3□□□□□ -1.72
CTNSO60931 AC067931.1-201ENST00000624190 671 ntBASIC4.3□□□□□ -1.72
CTNSO60931 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNSO60931 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNSO60931 DDX18P4-201ENST00000511690 1966 ntBASIC4.3□□□□□ -1.72
CTNSO60931 ASNSP1-201ENST00000518311 1939 ntBASIC4.3□□□□□ -1.72
CTNSO60931 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNSO60931 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTNSO60931 LINC01355-201ENST00000566551 5444 ntBASIC4.29□□□□□ -1.72
CTNSO60931 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CTNSO60931 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNSO60931 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNSO60931 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CTNSO60931 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNSO60931 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CTNSO60931 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNSO60931 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CTNSO60931 RNU6-398P-201ENST00000384143 109 ntBASIC4.29□□□□□ -1.72
CTNSO60931 MIR708-201ENST00000390708 88 ntBASIC4.29□□□□□ -1.72
CTNSO60931 RPS4XP9-201ENST00000405151 780 ntBASIC4.29□□□□□ -1.72
CTNSO60931 AC009302.1-201ENST00000417147 390 ntBASIC4.29□□□□□ -1.72
CTNSO60931 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTNSO60931 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.29□□□□□ -1.72
CTNSO60931 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
CTNSO60931 PGBD4P4-201ENST00000509673 613 ntBASIC4.29□□□□□ -1.72
CTNSO60931 HMGB3P13-201ENST00000511263 607 ntBASIC4.29□□□□□ -1.72
CTNSO60931 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 RN7SKP92-201ENST00000517266 244 ntBASIC4.29□□□□□ -1.72
CTNSO60931 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 HMGB3P26-201ENST00000560051 582 ntBASIC4.29□□□□□ -1.72
CTNSO60931 ADAD1P2-201ENST00000588476 646 ntBASIC4.29□□□□□ -1.72
CTNSO60931 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.29□□□□□ -1.72
CTNSO60931 AC008966.2-201ENST00000606157 453 ntBASIC4.29□□□□□ -1.72
CTNSO60931 SNORA35B-201ENST00000607417 129 ntBASIC4.29□□□□□ -1.72
CTNSO60931 AL133243.1-201ENST00000614487 366 ntBASIC4.29□□□□□ -1.72
CTNSO60931 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CTNSO60931 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNSO60931 AL049536.1-201ENST00000625043 744 ntBASIC4.29□□□□□ -1.72
CTNSO60931 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNSO60931 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CTNSO60931 MAPK10-303ENST00000641324 3959 ntBASIC4.29□□□□□ -1.72
CTNSO60931 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNSO60931 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CTNSO60931 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNSO60931 OR51C1P-202ENST00000641159 1444 ntBASIC4.29□□□□□ -1.72
CTNSO60931 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
CTNSO60931 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms