Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 SNORA72.1-201ENST00000363485 129 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 RNA5SP334-201ENST00000364825 118 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 RNU6-413P-201ENST00000384115 107 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 RNU6-1200P-201ENST00000384162 107 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 RNU2-41P-201ENST00000410991 178 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 RPL7P8-201ENST00000411964 730 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AC016397.1-201ENST00000412463 242 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 FAR2P2-201ENST00000413041 594 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 SRSF1P1-201ENST00000424058 520 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.13□□□□□ -1.43
RFXAPO00287 FAR2P4-202ENST00000425399 584 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.13□□□□□ -1.43
RFXAPO00287 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.13□□□□□ -1.43
RFXAPO00287 AL606490.7-201ENST00000433136 191 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.13□□□□□ -1.43
RFXAPO00287 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.13□□□□□ -1.43
RFXAPO00287 MRPL35P2-201ENST00000448009 511 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.13□□□□□ -1.43
RFXAPO00287 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.13□□□□□ -1.43
RFXAPO00287 DNAJB5P1-201ENST00000454004 806 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.13□□□□□ -1.43
RFXAPO00287 RPL7L1P3-201ENST00000455249 689 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AC103563.5-201ENST00000455643 364 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.13□□□□□ -1.43
RFXAPO00287 AC112187.1-201ENST00000455837 479 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.13□□□□□ -1.43
RFXAPO00287 RPL31P58-201ENST00000469001 379 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.13□□□□□ -1.43
RFXAPO00287 CEACAMP10-202ENST00000495431 496 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 HMGB3P13-201ENST00000511263 607 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.13□□□□□ -1.43
RFXAPO00287 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.13□□□□□ -1.43
RFXAPO00287 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.13□□□□□ -1.43
RFXAPO00287 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.13□□□□□ -1.43
RFXAPO00287 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RFXAPO00287 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.13□□□□□ -1.43
RFXAPO00287 AC126177.5-201ENST00000549599 178 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.13□□□□□ -1.43
RFXAPO00287 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.13□□□□□ -1.43
RFXAPO00287 AADACP1-206ENST00000561502 1193 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 FGF7P1-201ENST00000582820 288 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AC090970.3-201ENST00000612566 866 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 uc_338.18-201ENST00000615451 175 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AC008443.7-201ENST00000622195 246 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 AL157786.1-207ENST00000627771 695 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RFXAPO00287 AC011477.1-204ENST00000623416 1325 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 ZNF680P1-201ENST00000436625 1469 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.13□□□□□ -1.43
RFXAPO00287 AL033543.1-201ENST00000623440 13454 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RFXAPO00287 AL355852.1-201ENST00000454081 1771 ntBASIC6.13□□□□□ -1.43
RFXAPO00287 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RFXAPO00287 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RFXAPO00287 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.13□□□□□ -1.43
RFXAPO00287 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.13□□□□□ -1.43
RFXAPO00287 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RFXAPO00287 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.12□□□□□ -1.43
RFXAPO00287 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RFXAPO00287 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 AC005294.1-201ENST00000355509 281 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 U3.2-201ENST00000362981 210 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 Y_RNA.192-201ENST00000363977 102 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 RNU4-76P-201ENST00000364509 141 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 Y_RNA.554-201ENST00000384672 102 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RFXAPO00287 SNORA40.2-201ENST00000390847 128 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 USP9YP6-201ENST00000413550 854 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.12□□□□□ -1.43
RFXAPO00287 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.12□□□□□ -1.43
RFXAPO00287 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.12□□□□□ -1.43
RFXAPO00287 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.12□□□□□ -1.43
RFXAPO00287 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 HMGB1P31-201ENST00000437242 427 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RFXAPO00287 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.12□□□□□ -1.43
RFXAPO00287 USP9YP34-201ENST00000453983 808 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.12□□□□□ -1.43
RFXAPO00287 AC068522.1-201ENST00000482895 345 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.12□□□□□ -1.43
RFXAPO00287 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.12□□□□□ -1.43
RFXAPO00287 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
RFXAPO00287 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.12□□□□□ -1.43
RFXAPO00287 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.12□□□□□ -1.43
RFXAPO00287 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 OR6M2P-201ENST00000529831 871 ntBASIC6.12□□□□□ -1.43
RFXAPO00287 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.12□□□□□ -1.43
RFXAPO00287 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RFXAPO00287 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.12□□□□□ -1.43
RFXAPO00287 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms