Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 MRPL57P1-201ENST00000621486 265 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AL683826.1-201ENST00000624104 627 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC063952.1-203ENST00000634410 658 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AC135068.11-201ENST00000636378 921 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 AL157700.1-201ENST00000561973 1432 ntBASIC5.71□□□□□ -1.5
SHISA3A0PJX4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHISA3A0PJX4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC110716.2-201ENST00000563865 3945 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC092724.1-201ENST00000624623 3397 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 LCOR-201ENST00000286067 4542 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 U8.3-201ENST00000363321 132 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 Y_RNA.356-201ENST00000365475 113 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 Y_RNA.409-201ENST00000383990 98 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AL603766.1-201ENST00000407763 664 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 SPA17P1-201ENST00000416656 452 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC233981.1-201ENST00000423224 461 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AL022237.1-201ENST00000446663 358 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AL354714.5-201ENST00000450131 590 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AL929410.2-201ENST00000451170 189 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 OR6K1P-201ENST00000456766 971 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 RPS7P10-201ENST00000464254 603 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC018475.1-201ENST00000478358 465 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC106822.1-201ENST00000502647 526 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 MTND5P5-201ENST00000503764 376 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 OR7E161P-201ENST00000533722 967 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 ARL2BPP2-201ENST00000550907 489 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC125611.2-201ENST00000551907 647 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AL049869.4-201ENST00000555669 178 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AL845331.3-202ENST00000562856 261 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC026458.1-201ENST00000564330 438 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 MIR4685-201ENST00000578185 69 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 TPMTP1-201ENST00000592307 737 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 RPL12P25-202ENST00000598100 674 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 BNIP3P10-201ENST00000605360 577 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 MIR6731-201ENST00000614863 72 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AP001264.1-201ENST00000620602 703 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AC129778.1-202ENST00000623812 261 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AL591379.1-207ENST00000635982 261 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.7□□□□□ -1.5
SHISA3A0PJX4 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
SHISA3A0PJX4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms