Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 VDAC2P1-201ENST00000399358 958 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 HMGB3P7-201ENST00000400214 611 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 RNU4-34P-201ENST00000410431 124 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 NPM1P4-201ENST00000414095 812 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 TMBIM7P-201ENST00000418074 855 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 KRR1P1-201ENST00000419430 803 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 VN1R42P-201ENST00000424651 344 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC009238.2-201ENST00000431026 355 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 RAB9AP5-201ENST00000437794 597 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 MED6P1-201ENST00000439659 713 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 MTCO1P53-201ENST00000441633 699 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 RAB9AP2-201ENST00000443911 597 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 SETD6P1-201ENST00000444575 317 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AL031313.1-201ENST00000448435 256 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 NPM1P39-201ENST00000449818 867 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 VN1R40P-201ENST00000455196 941 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC020779.1-201ENST00000478757 796 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC112518.2-201ENST00000508565 425 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 HPRT1P1-201ENST00000509498 657 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC004923.2-201ENST00000529649 369 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC087894.1-201ENST00000538359 518 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC008147.3-201ENST00000548666 354 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC023824.3-201ENST00000569003 562 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 MIR4505-201ENST00000582238 73 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC084373.1-201ENST00000603311 235 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AL022161.1-201ENST00000604390 213 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC092954.1-201ENST00000609121 445 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC093875.1-201ENST00000623688 504 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC004943.3-201ENST00000624116 600 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 C4BPAP1-201ENST00000415474 1893 ntBASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGB1Q9Y5G3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 AL672167.2-201ENST00000377164 879 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 HMGB3P19-201ENST00000403971 560 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 AL355615.1-201ENST00000406187 641 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 DPPA2P3-201ENST00000411853 655 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 SEPT7P8-201ENST00000413308 775 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 ZNF885P-201ENST00000420174 1098 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 AC093155.2-201ENST00000420734 937 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 OR2X1P-201ENST00000421144 687 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 AC115285.1-201ENST00000424879 736 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 MTND5P25-201ENST00000430499 799 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 VN1R108P-201ENST00000431580 830 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 RPS7P2-201ENST00000435134 607 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 OR6D1P-201ENST00000436165 939 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 AC002504.1-201ENST00000438281 691 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 PTMAP6-201ENST00000439110 327 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 OR10R1P-201ENST00000441524 1141 ntBASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGB1Q9Y5G3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms