Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MIR93-201ENST00000385024 80 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC009804.1-201ENST00000400949 179 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 ST13P16-201ENST00000401760 781 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 UBTFL3-201ENST00000418934 1024 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC004552.1-201ENST00000419089 348 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 RPL7P33-201ENST00000444159 742 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 EIF2S2P4-201ENST00000461070 984 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 RPS26P3-201ENST00000470205 348 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC097484.1-201ENST00000471148 389 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC108729.2-201ENST00000476543 840 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 UBTFL6-201ENST00000477929 1024 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC090543.2-201ENST00000483963 348 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC004057.1-201ENST00000485827 348 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 RN7SL214P-201ENST00000487317 265 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 UBA52P3-201ENST00000491303 382 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 RN7SL244P-201ENST00000493405 297 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC025164.1-201ENST00000496249 478 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC108157.1-201ENST00000510511 539 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 RNA5SP228-201ENST00000516232 133 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 IGLVIV-64-201ENST00000518581 301 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC112191.2-201ENST00000522428 333 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 OR7E128P-201ENST00000532736 1024 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC092451.2-201ENST00000538746 658 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AL049839.1-201ENST00000556151 657 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AP005119.2-201ENST00000579735 1105 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC091178.1-203ENST00000584586 279 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 MIMT1-201ENST00000597105 1050 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 BNIP3P39-201ENST00000601077 554 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AL353726.1-201ENST00000614041 1000 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AL023881.1-201ENST00000621088 301 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 AC093535.2-201ENST00000624769 2326 ntBASIC4.55□□□□□ -1.68
NDE1Q9NXR1 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NDE1Q9NXR1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 HSPA8P17-201ENST00000427029 1382 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC009501.3-201ENST00000605001 1352 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC110792.3-201ENST00000595906 1614 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 RN7SKP115-201ENST00000363177 317 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 RNU1-43P-201ENST00000365052 165 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 RHOT1P2-201ENST00000366423 333 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC019155.1-201ENST00000382242 574 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AL645733.1-201ENST00000402250 217 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 PTGES3P2-201ENST00000407942 482 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 EIF4A1P3-201ENST00000411521 244 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 LINC00993-201ENST00000420453 540 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 Z99127.2-201ENST00000441426 334 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 RN7SL547P-201ENST00000490793 290 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.54□□□□□ -1.68
NDE1Q9NXR1 AC106806.2-201ENST00000509365 500 ntBASIC4.54□□□□□ -1.68
NDE1Q9NXR1 HMGB3P13-201ENST00000511263 607 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms