Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNF19BPX-201ENST00000426224 625 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 MTCO1P45-201ENST00000431457 267 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 ARL5AP3-201ENST00000439327 386 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 RPL31P20-201ENST00000449593 360 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 CEACAMP6-201ENST00000452007 574 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC005008.1-201ENST00000456151 612 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC022336.1-201ENST00000475510 337 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 RPL32P9-201ENST00000487963 407 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC090151.1-201ENST00000520784 730 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 HMGB2P1-201ENST00000591146 634 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 BNIP3P27-201ENST00000599991 412 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC068790.7-201ENST00000602347 528 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC005776.1-201ENST00000603164 290 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC103792.1-201ENST00000603591 919 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC008966.2-201ENST00000606157 453 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC026979.4-201ENST00000606555 645 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC211433.2-201ENST00000608433 387 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AC091953.3-201ENST00000623220 236 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 AP003499.2-201ENST00000624100 483 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 OR2L1P-202ENST00000641567 1023 ntBASIC4.89□□□□□ -1.63
SIX2Q9NPC8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIX2Q9NPC8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 OR51H2P-202ENST00000641424 3046 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 SNORD51.1-201ENST00000365405 77 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 RNA5SP372-201ENST00000390836 115 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 OR11I1P-201ENST00000486033 954 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC090543.1-201ENST00000492168 485 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AP003102.1-201ENST00000525638 661 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 MTND5P21-201ENST00000531961 522 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 PCNPP1-201ENST00000552501 511 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AL390726.5-202ENST00000564800 256 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC126365.2-201ENST00000580630 379 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 RN7SL690P-201ENST00000582087 240 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 MIMT1-201ENST00000597105 1050 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 BPIFA4P-203ENST00000603168 689 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 HMGB1P51-201ENST00000605166 638 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC242628.1-201ENST00000606810 391 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 MIR6891-201ENST00000618788 93 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC091905.2-201ENST00000623143 306 ntBASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.88□□□□□ -1.63
SIX2Q9NPC8 AC139769.1-204ENST00000472297 1931 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 NXPH1-205ENST00000602349 1953 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC110792.3-201ENST00000595906 1614 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC007342.5-201ENST00000571340 2142 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 OR10AB1P-202ENST00000641219 1686 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 IL6STP1-201ENST00000346911 1020 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 SNORA58B-201ENST00000364259 136 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL356057.1-202ENST00000402263 756 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 Z98745.1-201ENST00000402553 494 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 FCF1P5-201ENST00000406490 482 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 PTGES3P2-201ENST00000407942 482 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms