Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RPS26P38-201ENST00000414476 348 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 LINC01881-201ENST00000416103 412 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VTA1Q9NP79 OR5M12P-201ENST00000423388 929 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 C1DP1-201ENST00000426049 402 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 RPS23P9-201ENST00000448848 438 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VTA1Q9NP79 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 RN7SKP66-201ENST00000516681 231 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 RNA5SP373-201ENST00000517271 95 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 YWHABP2-201ENST00000540201 713 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC011447.4-201ENST00000587562 111 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC060780.2-201ENST00000589047 198 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 VN1R88P-201ENST00000596787 292 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC091057.2-201ENST00000602594 792 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VTA1Q9NP79 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AP001284.1-201ENST00000528393 2118 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC239868.2-201ENST00000564237 4527 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC104454.1-201ENST00000421341 1401 ntBASIC6.08□□□□□ -1.44
VTA1Q9NP79 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VTA1Q9NP79 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VTA1Q9NP79 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AP002512.4-202ENST00000641599 4530 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC104446.1-201ENST00000613728 1321 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VTA1Q9NP79 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VTA1Q9NP79 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VTA1Q9NP79 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VTA1Q9NP79 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 RNU6-1214P-201ENST00000363650 109 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 RBMY2KP-201ENST00000418221 992 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC027644.1-201ENST00000419595 298 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC093162.1-201ENST00000419682 124 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC009263.1-201ENST00000441193 1239 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 Z92846.1-201ENST00000456203 268 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AL122001.1-201ENST00000457027 370 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 RPL35AP28-201ENST00000459730 331 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 RN7SL188P-201ENST00000469842 285 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC092490.3-201ENST00000545370 572 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC023813.2-201ENST00000564321 469 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 MTCO1P40-201ENST00000574371 625 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC010503.3-201ENST00000594355 540 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 ZNF92P3-201ENST00000596594 954 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AL583856.2-201ENST00000606298 543 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC092106.3-201ENST00000611308 722 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 MIR7973-1-201ENST00000614683 76 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AL078621.3-201ENST00000623707 2042 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC011933.2-201ENST00000578539 2790 ntBASIC6.07□□□□□ -1.44
VTA1Q9NP79 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VTA1Q9NP79 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VTA1Q9NP79 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VTA1Q9NP79 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
VTA1Q9NP79 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VTA1Q9NP79 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
VTA1Q9NP79 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
VTA1Q9NP79 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms