Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNU6-304P-201ENST00000364855 107 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 OR2B7P-201ENST00000429302 934 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 RPL31P20-201ENST00000449593 360 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 RPL12P20-201ENST00000475538 479 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 RN7SL441P-201ENST00000492388 296 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 HMGB3P16-201ENST00000508037 287 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 ENPP7P9-201ENST00000514456 627 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 RNA5SP464-201ENST00000516251 108 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC098935.2-201ENST00000604222 466 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC083809.1-201ENST00000615051 472 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC108359.1-201ENST00000616451 1211 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 MIR6853-201ENST00000619642 74 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 CR381572.2-201ENST00000624852 397 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 AC010928.1-201ENST00000592477 1447 ntBASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.87□□□□□ -1.63
TM9SF3Q9HD45 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 RPL32P3-201ENST00000359025 275 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AL035079.1-201ENST00000405210 287 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 P2RY10P2-201ENST00000416730 913 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 RPL18P10-201ENST00000425606 538 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 TXNP5-201ENST00000441043 315 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 RN7SKP46-201ENST00000515942 234 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 RNA5SP392-201ENST00000516905 112 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 RN7SKP92-201ENST00000517266 244 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 NDUFB4P11-201ENST00000560510 395 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 ADAM3B-201ENST00000569937 840 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 RN7SL690P-201ENST00000582087 240 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 NCLP2-201ENST00000416078 1462 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AC000123.3-201ENST00000624029 4975 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 AL132640.2-201ENST00000559968 1698 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 Z95327.2-201ENST00000414579 1873 ntBASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TM9SF3Q9HD45 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 RN7SKP106-201ENST00000410832 272 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 RSU1P3-201ENST00000412878 835 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 TBCAP2-201ENST00000416175 326 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 TRGV6-201ENST00000417928 299 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AL358176.3-201ENST00000420757 454 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 RPL12P34-201ENST00000424532 479 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 RPL12P28-201ENST00000430852 489 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms