Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 MIR921-201ENST00000401133 56 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 SNORA11F-201ENST00000408237 128 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 UBTFL3-201ENST00000418934 1024 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 VDAC1P6-201ENST00000430062 855 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 UBTFL6-201ENST00000477929 1024 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AC041039.1-201ENST00000485656 536 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 USP9YP2-201ENST00000504503 1000 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 USP9YP1-201ENST00000513521 1002 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AC124068.1-201ENST00000563131 678 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AC023575.1-201ENST00000580510 358 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AC007546.2-201ENST00000623996 360 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AC008013.2-202ENST00000637965 364 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AL513548.1-201ENST00000562904 1724 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AC005332.5-201ENST00000591222 2919 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 AC005261.4-201ENST00000600047 1385 ntBASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KIAA1549Q9HCM3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 SNORD96B-201ENST00000386148 79 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 RPS12P10-201ENST00000427031 377 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 NPM1P25-201ENST00000429734 854 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 ACTR3P2-201ENST00000439585 1257 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AL445433.1-201ENST00000457507 257 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC010618.1-201ENST00000469924 477 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC105137.1-201ENST00000484355 562 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 RPS4XP18-201ENST00000495480 763 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC138938.1-201ENST00000515431 782 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC090515.3-201ENST00000560431 315 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AL035461.2-201ENST00000619201 524 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC091046.3-201ENST00000631455 1574 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 SNORA57.1-201ENST00000391227 145 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 FCF1P5-201ENST00000406490 482 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 RPS27AP15-201ENST00000447672 466 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC104164.2-201ENST00000496953 495 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 MIR6716-201ENST00000613413 80 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 AC007546.1-201ENST00000619452 559 ntBASIC3.98□□□□□ -1.77
KIAA1549Q9HCM3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 RPS27AP12-201ENST00000429552 465 ntBASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 PRELID3BP10-201ENST00000431957 584 ntBASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.97□□□□□ -1.77
KIAA1549Q9HCM3 ABCF2P2-201ENST00000450549 296 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms